Pairwise Alignments

Query, 332 a.a., Ribosomal RNA small subunit methyltransferase C from Pseudomonas putida KT2440

Subject, 338 a.a., hypothetical protein from Sinorhizobium meliloti 1021

 Score = 85.1 bits (209), Expect = 2e-21
 Identities = 76/250 (30%), Positives = 113/250 (45%), Gaps = 18/250 (7%)

Query: 68  FDSAVLFLPKSR-ELAAYLLNALASRLAGRELYLVGEKRGGIEGAAKQLQAFGKPRKLDS 126
           +D+A++   + + E    +  AL    AG  + + G K  GI+   K++  FG       
Sbjct: 75  YDAALVLCGRHKGENEDRIAQALERTRAGALIVVAGGKEDGIQSLRKRIDKFGWDGDSMP 134

Query: 127 ARHCQLWQVTIDQAPQAKPLESLAERFELALEDGPLQV----VSLPGVFSHGRLDRGTAL 182
             H   +  T       +P E  AE    AL   P++V    V+ PG+FSH R+D G+ L
Sbjct: 135 KYHGVAFWFT-------RP-EDAAEAIS-ALAKVPVRVHGLFVASPGMFSHDRVDAGSEL 185

Query: 183 LLKHLDGLPGGHMLDFGCGAGVLGATLKRRYPQSR-VTLLDVDAFAVAASRLTLAANGLE 241
           L   L     GH  DFG G G L   L    P  + + L + D  A+ A+R  +AAN   
Sbjct: 186 LASRLPRDFTGHAADFGAGWGYLSVKLAEASPSLKGIDLFEADFEALEAARANMAANAPS 245

Query: 242 GEV-ISGDGIDAAPT--ELSLILSNPPFHTGVHTNYQASENLLKKSAVHLRKGGEMRLVA 298
                    + A  T  +  LI+ NPPFH G          ++K +A  L+ GG + LVA
Sbjct: 246 TAARFYWHDLTAEETRDKYDLIVMNPPFHEGHAAEPALGAAMIKAAAKALKHGGRLMLVA 305

Query: 299 NSFLRYQPLI 308
           N  L Y+P++
Sbjct: 306 NRGLPYEPVL 315