Pairwise Alignments

Query, 332 a.a., Ribosomal RNA small subunit methyltransferase C from Pseudomonas putida KT2440

Subject, 383 a.a., rRNA (guanine-N(2)-)-methyltransferase (RefSeq) from Shewanella amazonensis SB2B

 Score = 96.3 bits (238), Expect = 1e-24
 Identities = 77/267 (28%), Positives = 124/267 (46%), Gaps = 18/267 (6%)

Query: 75  LPKSRELAAYLLNALASRLAGRELYLVGEKRGGIEGAAKQL--QAFGKPRKLDSARHCQL 132
           LPK+       L+ L+  LA  ++ L+G K   I  +   L  +A G      + +  ++
Sbjct: 125 LPKNLNFLTDTLSQLSQTLAAGDVILMGAKAKHINQSLLALIAKAVGPATASLTWKKTRI 184

Query: 133 WQVTIDQAPQAKPLESLAERFELALEDGPLQVVSLPGVFSHGRLDRGTALLLKHLDGLPG 192
             +T D  P+     S+ +     + +  L+V +L  VF+  +LD G  L++ +L   P 
Sbjct: 185 ITITADGNPRPVSKPSVWD-----VPEHGLKVTNLSNVFAASKLDIGARLMMANL---PQ 236

Query: 193 GH---MLDFGCGAGVLGATLKRRYPQSRVTLLDVDAFAVAASRLTLAANGLE---GEVIS 246
           GH   ++D GCG GVL     + YP +R+ L+D  A AV ++R   A N L+    E I 
Sbjct: 237 GHFSSVIDLGCGNGVLALKAAQTYPDARLYLVDESAMAVESARQNWALNALDEGRAEFIW 296

Query: 247 GDGIDAAPTEL--SLILSNPPFHTGVHTNYQASENLLKKSAVHLRKGGEMRLVANSFLRY 304
            D +   P E+   L+L NPPFH G       +  +   +   L+ GG + +V N  L Y
Sbjct: 297 DDCLSHLPNEVQADLVLCNPPFHQGEAITDHIAWQMFNDAKRALKPGGLLHIVGNRHLGY 356

Query: 305 QPLIEGALGNCQVRDEADGFRIYQATR 331
              ++   GNC+       F I QA +
Sbjct: 357 HIKLKRLFGNCKTIASNGKFVILQAVK 383