Pairwise Alignments

Query, 332 a.a., Ribosomal RNA small subunit methyltransferase C from Pseudomonas putida KT2440

Subject, 401 a.a., rRNA (guanine-N(2)-)-methyltransferase (RefSeq) from Shewanella loihica PV-4

 Score = 88.6 bits (218), Expect = 2e-22
 Identities = 77/292 (26%), Positives = 123/292 (42%), Gaps = 37/292 (12%)

Query: 62  EAPEAAFDSAVLFLPKSRELAAYLLNALASRLAGRELYLVGEKRGGIEGAAKQLQAFGKP 121
           E P    +  ++ LPK+     + L  L+  LA      +G K   I  A  +  A    
Sbjct: 106 ELPPQGINLVLMKLPKNLNYFIHQLQRLSQSLAPNTPVYIGAKAKSINKALLETIA---- 161

Query: 122 RKLDSARHCQLWQVT------IDQAPQAKPLESLAERFELALEDGPLQVVSLPGVFSHGR 175
           + L  A     W+ T       D  P+A P E        A+++  L + +L  VF+  +
Sbjct: 162 KHLGPASASLAWKKTRVITCIADGKPRALPSE-----VSWAVKEFNLSISNLSNVFAANK 216

Query: 176 LDRGTALLLKHLDGLPGGH---MLDFGCGAGVLGATLKRRYPQSRVTLLDVDAFAVAASR 232
           LD G  ++L   D LP GH   ++D GCG G+LG   K+ YP + V  +D    A+ ++R
Sbjct: 217 LDIGARIML---DNLPEGHFDTIVDLGCGNGILGLRAKQCYPNAEVHFVDDSEMAITSAR 273

Query: 233 LTLAANGLEG-------------EVISGDGIDAAPTELSLILSNPPFHTGVHTNYQASEN 279
               AN L+              + ++  G +  P    L+L NPPFH G       +  
Sbjct: 274 QNWQANKLDNPEQAKPQGHFHWDDCLTHLGDEVKP---DLVLCNPPFHQGEAITDHIAWQ 330

Query: 280 LLKKSAVHLRKGGEMRLVANSFLRYQPLIEGALGNCQVRDEADGFRIYQATR 331
           +   +   LR GG +++V N  L Y   ++    NC+       F I +A +
Sbjct: 331 MFLDAFHQLRPGGMLQVVGNRHLGYHVKLKRIFKNCETAASNGKFVILRAIK 382