Pairwise Alignments

Query, 332 a.a., Ribosomal RNA small subunit methyltransferase C from Pseudomonas putida KT2440

Subject, 342 a.a., 16S rRNA (guanine(1207)-N(2))-methyltransferase from Klebsiella michiganensis M5al

 Score =  193 bits (490), Expect = 6e-54
 Identities = 123/333 (36%), Positives = 185/333 (55%), Gaps = 12/333 (3%)

Query: 3   PRSEVLLRQAELFQGP-LLIAGAPADDLLGQLPQA--QAWTWHAGDQAMLESRFAGRSHY 59
           P SEVLLR ++ F+   +L AG   DDL  +L  A  +A T       +L  +    + Y
Sbjct: 6   PASEVLLRHSDDFESARVLFAGDLQDDLPARLDTAASRAHTQQFHHWQVLSRQMGENARY 65

Query: 60  GVEAPE---AAFDSAVLFLPKSRELAAY-LLNALASRLAGRELYLVGEKRGGIEGAAKQL 115
            + A     A  D+ + + PK++  A + L+N L+    G ++++VGE R G+  A + L
Sbjct: 66  SLVAEAGDVADCDTLIYYWPKNKPEAQFQLMNLLSLLPTGIDIFVVGENRSGVRSAEQML 125

Query: 116 QAFGKPRKLDSARHCQLWQVTIDQAPQAKPLESLAERFELALEDGPLQVVSLPGVFSHGR 175
             +    K+DSAR C L+   +++ P   P +   E     LE+  L + +LPGVFS   
Sbjct: 126 AEYAPLSKIDSARRCGLYHGRLEKQPTFDPEQYWGE---YPLEN--LTIKTLPGVFSRDG 180

Query: 176 LDRGTALLLKHLDGLPGGHMLDFGCGAGVLGATLKRRYPQSRVTLLDVDAFAVAASRLTL 235
           LD G+ LLL  L     G +LD GCGAGVL   L    P+ R+TL DV A AV ASR TL
Sbjct: 181 LDIGSQLLLSTLTPHTKGKVLDVGCGAGVLATVLASHSPKVRLTLCDVSAPAVEASRATL 240

Query: 236 AANGLEGEVISGDGIDAAPTELSLILSNPPFHTGVHTNYQASENLLKKSAVHLRKGGEMR 295
           AANG+EGEV + +          +I+SNPPFH G+ T+ +A++ L++ +  HL  GGE+R
Sbjct: 241 AANGIEGEVFASNVFSEVNGRFDMIISNPPFHDGLQTSLEAAQTLIRGAVRHLNSGGELR 300

Query: 296 LVANSFLRYQPLIEGALGNCQVRDEADGFRIYQ 328
           +VAN+FL Y  +++   G  +V  +   F++Y+
Sbjct: 301 IVANAFLPYPNVLDEIFGFHEVIAQTGRFKVYR 333