Pairwise Alignments

Query, 480 a.a., deoxyribodipyrimidine photolyase from Pseudomonas putida KT2440

Subject, 469 a.a., deoxyribodipyrimidine photo-lyase from Vibrio cholerae E7946 ATCC 55056

 Score =  360 bits (923), Expect = e-104
 Identities = 197/471 (41%), Positives = 269/471 (57%), Gaps = 9/471 (1%)

Query: 1   MHLTWLRSDLRIDDNTALSASTERG-PTIALWLVSPGQWQAHDDADCKVDFWLRNLHDLR 59
           M L W R DLR  DNTAL+A+   G P  A+++ +P QW  H  A  + D   R L +L+
Sbjct: 1   MRLVWFRRDLRSFDNTALTAALNSGDPVAAMYIATPEQWHQHHLAPIQADLIWRRLAELQ 60

Query: 60  QSLEKLNIPLLIRTIDTWDQAPQAVLDICRQHQVQSVHWNEEYGINEQRRDDATRAMLEK 119
           Q L  LN+PL  + +  +  A  AV  + +      V  N +Y ++EQ+RD   + +L +
Sbjct: 61  QELAALNVPLFYQQVADFQAAAVAVSQLAKTLNATQVLANRDYELDEQQRDQLAQQLLSE 120

Query: 120 SAIQAHSHLDQLFFRPGTVLTRSGDYFQVFSQFKKTCLEHLHRSLPALARRVKRQAPLNI 179
             I   +  D+    PG+V T+ G++F+VF+ FK+  L       P +  + +  A  N+
Sbjct: 121 QGIIWSAFDDKCVLPPGSVRTKQGEFFKVFTPFKRAWLTLFQ---PPVIGKNRPVALWNV 177

Query: 180 GSD--PIPQHVEGFGKTTPALRDHWPAGEAEAQSRLSRFLDETIDDYHHLRDLPAKPGTS 237
            S    +  H E            W A     +++L  F  E + DYH  RD PA+ GTS
Sbjct: 178 PSALAELVWHPEQAFDYPRIDSTPWAADFETVRAQLRDFCRERVQDYHQARDFPAREGTS 237

Query: 238 QLSPYLAAGVISPRQCLHGALAGNRGEFDSGSTGVQTWINELLWREFYKHILSGYPQVSR 297
            LSPYLA GV+S RQC+  A   +       S G Q W++EL+WREFY+H+++  P +S+
Sbjct: 238 SLSPYLAIGVLSARQCV--ARLYHESSMGELSEGAQVWLSELIWREFYQHLVAIEPNLSK 295

Query: 298 HRAFRAQTEALPWRDAPADLAAWEQGRTGFPIIDAAMRQLLHTGWMHNRLRMVVAMFLSK 357
            R F      L W +       W +G+TG+PI+DAAMRQL  TGWMHNRLRM+VA FL+K
Sbjct: 296 SRDFVEWGARLEWWNDNEKFQLWCEGKTGYPIVDAAMRQLNQTGWMHNRLRMIVASFLTK 355

Query: 358 NLLIDWRKGERHFMRHLIDGDLAANNGGWQWSASTGTDAVPYFRIFNPVSQSQRFDPQGR 417
           +L IDWR GER+FM  LIDGD AANNGGWQW ASTG D  PYFRIFNPVSQ ++FDP G 
Sbjct: 356 DLHIDWRWGERYFMSRLIDGDYAANNGGWQWCASTGCDGQPYFRIFNPVSQGEKFDPNGD 415

Query: 418 FIRHWVPELQELDEKAIHQPIKSTDLFGNTSYLSPIVDLSSSRQRALEAFK 468
           FIR WVPEL+ +    IHQP  +     +  Y + +VD    R+  L  +K
Sbjct: 416 FIRRWVPELRSVSSAYIHQP-WTYPAVNSVLYPARLVDHKQEREVTLRLYK 465