Pairwise Alignments

Query, 480 a.a., deoxyribodipyrimidine photolyase from Pseudomonas putida KT2440

Subject, 461 a.a., cryptochrome DASH from Vibrio cholerae E7946 ATCC 55056

 Score =  112 bits (279), Expect = 3e-29
 Identities = 123/439 (28%), Positives = 187/439 (42%), Gaps = 47/439 (10%)

Query: 3   LTWLRSDLRIDDNTALSASTERG---------PTIALWLVSPGQWQAHDDADCKVDFWLR 53
           L W  +DLR++DN  L  ++++          P+I  +L    Q     +A  K  F  +
Sbjct: 7   LYWFTNDLRVNDNPLLEQASQQVDRLICLYCYPSITPFLARYAQQTQWGEA--KKRFLNQ 64

Query: 54  NLHDLRQSLEKLNIPLLIRTIDTWDQAPQAVLDICRQHQVQSVHWNEEYGINEQRRDDAT 113
            L DL  SL  L   L +  +  +    QA+  +  Q ++  ++ +   G +E  R    
Sbjct: 65  TLADLDHSLSTLGQKLWVTPLLPY----QALRHLLTQVEITDIYVDAVAGSDE--RQAIA 118

Query: 114 RAMLEKSAIQAHSH-LDQLFFRPGTVLTRSGDYFQVFSQFKKTCLEHLHRSLPALARRVK 172
           R   + S++  H   L  L   P             F+QF+K  +E +  S P     V 
Sbjct: 119 RIHQDFSSVHIHQQALHSLLSEPQLPFALEA-LPSTFTQFRKQ-VETISLSAPMGYPHVL 176

Query: 173 R------QAPL-NIGSDPIPQHVEGFGKTTPALRDHWPAGEAEAQSRLSRFLDETIDDYH 225
                  Q PL +I ++P      G  +          AG    Q+  S  L     +  
Sbjct: 177 PPIEQGWQLPLMDIVTEPNHSAFVGGEQ----------AGLTHCQNYFSSLLPSRYKETR 226

Query: 226 HLRDLPAKPGTSQLSPYLAAGVISPRQCLHGALAGNRGEFDSGSTGVQTWIN-ELLWREF 284
           +   L     +++ SP+LA G +SP+  ++  L   R E   G+     WI  ELLWRE+
Sbjct: 227 N--GLDGMDYSTKFSPWLALGAVSPKT-IYAML--QRYEAVHGANDSTYWIFFELLWREY 281

Query: 285 YKHILSGYPQVSRHRAFRAQTEALPWRDAPAD-LAAWEQGRTGFPIIDAAMRQLLHTGWM 343
           +      Y   ++   F    E  P     A     W+ G T FPI++A MRQL  TG+M
Sbjct: 282 FYWYARRYG--AKLFRFSGIGEKKPLTSFYAQRFLQWKHGETPFPIVNACMRQLNQTGYM 339

Query: 344 HNRLRMVVAMFLSKNLLIDWRKGERHFMRHLIDGDLAANNGGWQWSASTGTDAVPYFRIF 403
            NR R +VA  L   L +DWR G  +F   L+D D+ +N G WQ+ A  G D     R F
Sbjct: 340 SNRGRQLVASCLVHELGLDWRYGAAYFETQLVDYDVGSNWGNWQYLAGVGADP-RGSRQF 398

Query: 404 NPVSQSQRFDPQGRFIRHW 422
           N   Q+  +DP+G F+  W
Sbjct: 399 NLEKQAHTYDPKGEFVAKW 417