Pairwise Alignments

Query, 480 a.a., deoxyribodipyrimidine photolyase from Pseudomonas putida KT2440

Subject, 488 a.a., deoxyribodipyrimidine photo-lyase, 8-HDF type from Synechocystis sp000284455 PCC 6803

 Score =  270 bits (689), Expect = 1e-76
 Identities = 172/464 (37%), Positives = 245/464 (52%), Gaps = 22/464 (4%)

Query: 3   LTWLRSDLRIDDNTALSASTER-GPTIALWLVSPGQWQAHDDADCKVDFWLRNLHDLRQS 61
           L W R DLR++D+ AL+ + ++    + ++ +     QA D A  +V + L  L  L+  
Sbjct: 20  LLWHRRDLRLNDHLALAKARQKTAKIVGVFCLDNKILQAEDMAPARVAYLLGCLQSLQDH 79

Query: 62  LEKLNIPLLIRTIDTWDQAPQAVLDICRQHQVQSVHWNEEYGINEQRRDDATRAMLEKSA 121
            ++L   LL+   D     P+    +        V W  +     Q+RD A    L +  
Sbjct: 80  YQRLGSELLVFQADPVQLLPK----LANTLGAHGVTWTLDTEPYAQKRDLAVAQALRERG 135

Query: 122 IQAHSHLDQLFFRPGTVLTRSGDYFQVF-------SQFKKTCLEHLHRSLPALARRVKRQ 174
           +   +  DQL   PG VLT++G  + V+       SQ  KT      + L  L    K +
Sbjct: 136 LAIATEWDQLMHHPGEVLTQAGSPYTVYTPFWKNWSQLPKTSPVPTPKDLQGLTPAEKEK 195

Query: 175 -APLNIGSDPIPQHVE-GFGKTTPALRDHWPAGEAEAQSRLSRFLDETIDDYHHLRDLPA 232
            APL   +  IPQ  + GF    P        GE  A+ RL  F+   +++Y   R+ PA
Sbjct: 196 LAPLEPLA--IPQLADLGFIWDQPL---PLTPGEEAAEQRLDWFVAHGLEEYQQNRNFPA 250

Query: 233 KPGTSQLSPYLAAGVISPRQCLHGAL-AGNRGEFDSGSTGVQTWINELLWREFYKHILSG 291
             GTSQLS  L  GVISPR      L A  +   +     ++TW  EL WREFY+H L  
Sbjct: 251 LDGTSQLSAALKFGVISPRTLWQTTLEAWEQSRSEEARASIETWQQELAWREFYQHCLYS 310

Query: 292 YPQVSRHRAFRAQTEALPWRDAPADLAAWEQGRTGFPIIDAAMRQLLHTGWMHNRLRMVV 351
           +P +++   +R+  +  PW +      AW +GRTG+PIIDAAM QL  TGWMHNR RM+V
Sbjct: 311 FPALAQG-PYRSPFQEFPWEENQDHFQAWCEGRTGYPIIDAAMAQLNQTGWMHNRCRMIV 369

Query: 352 AMFLSKNLLIDWRKGERHFMRHLIDGDLAANNGGWQWSASTGTDAVPYFRIFNPVSQSQR 411
           A FL K+L+++W+ GE +FM+ L DGDLAANNGGWQWSAS+G D  P  RIFNP +Q+Q+
Sbjct: 370 ASFLIKDLILNWQWGELYFMQTLYDGDLAANNGGWQWSASSGMDPKP-LRIFNPHTQAQK 428

Query: 412 FDPQGRFIRHWVPELQELDEKAIHQPIKSTDLFGNTSYLSPIVD 455
           FDP+G +IR W+P+L   D   +     +     + +Y  PIVD
Sbjct: 429 FDPEGEYIRTWLPQLARFDTGDLLTGKLTPGSRRSVNYPEPIVD 472