Pairwise Alignments

Query, 480 a.a., deoxyribodipyrimidine photolyase from Pseudomonas putida KT2440

Subject, 484 a.a., Deoxyribodipyrimidine photo-lyase type I from Synechococcus elongatus PCC 7942

 Score =  282 bits (722), Expect = 2e-80
 Identities = 166/448 (37%), Positives = 236/448 (52%), Gaps = 36/448 (8%)

Query: 3   LTWLRSDLRIDDNTALSAS-TERGPTIALWLVSPGQWQAHDDADCKVDFWLRNLHDLRQS 61
           L W R DLR+ DN  L+A+  +    I L+ + P   Q+ D A  +V +    L +L+Q 
Sbjct: 6   LFWHRRDLRLSDNIGLAAARAQSAQLIGLFCLDPQILQSADMAPARVAYLQGCLQELQQR 65

Query: 62  LEKLNIPLLIRTIDTWDQAPQAVLDICRQHQVQSVHWNEEYGINEQRRDDATRAMLEKSA 121
            ++    LL+   D     PQ    + +Q Q ++V+WN++     + RD    A L+ + 
Sbjct: 66  YQQAGSRLLLLQGDPQHLIPQ----LAQQLQAEAVYWNQDIEPYGRDRDGQVAAALKTAG 121

Query: 122 IQAHSHLDQLFFRPGTVLTRSGDYFQVFSQFKKTCLEHLHRSLPALARRVKRQAPLNIGS 181
           I+A    DQL   P  +L+ SG+ + V+  F K              +   +  P+   +
Sbjct: 122 IRAVQLWDQLLHSPDQILSGSGNPYSVYGPFWKNW------------QAQPKPTPVATPT 169

Query: 182 DPIPQHVEGFGKTTPALRDHWPA----------------GEAEAQSRLSRFLDETIDDYH 225
           + +    E      P L    P                 GE  A +RL  F D  I DY 
Sbjct: 170 ELVDLSPEQLTAIAPLLLSELPTLKQLGFDWDGGFPVEPGETAAIARLQEFCDRAIADYD 229

Query: 226 HLRDLPAKPGTSQLSPYLAAGVISPRQCLHGALAGNR-GEFDSGSTGVQTWINELLWREF 284
             R+ PA+ GTS LSP L  G I  RQ    A A +     D     ++ W  EL WREF
Sbjct: 230 PQRNFPAEAGTSGLSPALKFGAIGIRQAWQAASAAHALSRSDEARNSIRVWQQELAWREF 289

Query: 285 YKHILSGYPQVSRHRAFRAQTEALPWRDAPADLAAWEQGRTGFPIIDAAMRQLLHTGWMH 344
           Y+H L  +P ++    +R+  +  PW +  A   AW Q +TG+PI+DAAMRQL  TGWMH
Sbjct: 290 YQHALYHFPSLA-DGPYRSLWQQFPWENREALFTAWTQAQTGYPIVDAAMRQLTETGWMH 348

Query: 345 NRLRMVVAMFLSKNLLIDWRKGERHFMRHLIDGDLAANNGGWQWSASTGTDAVPYFRIFN 404
           NR RM+VA FL+K+L+IDWR+GE+ FM+HL+DGDLAANNGGWQWSAS+G D  P  RIFN
Sbjct: 349 NRCRMIVASFLTKDLIIDWRRGEQFFMQHLVDGDLAANNGGWQWSASSGMDPKP-LRIFN 407

Query: 405 PVSQSQRFDPQGRFIRHWVPELQELDEK 432
           P SQ+++FD    +I+ W+PEL+ +  K
Sbjct: 408 PASQAKKFDATATYIKRWLPELRHVHPK 435