Pairwise Alignments

Query, 480 a.a., deoxyribodipyrimidine photolyase from Pseudomonas putida KT2440

Subject, 480 a.a., deoxyribodipyrimidine photo-lyase from Klebsiella michiganensis M5al

 Score =  391 bits (1005), Expect = e-113
 Identities = 211/472 (44%), Positives = 284/472 (60%), Gaps = 14/472 (2%)

Query: 2   HLTWLRSDLRIDDNTALSASTE--RGPTIALWLVSPGQWQAHDDADCKVDFWLRNLHDLR 59
           HL W R+DLR+ DN AL+A+        + L++ +PGQW+ H  A  +  F + +LH L+
Sbjct: 4   HLVWFRADLRMHDNLALAAACRDPHAEVLGLFIATPGQWRQHGMAARQAAFIVSHLHSLQ 63

Query: 60  QSLEKLNIPLLIRTIDTWDQAPQAVLDICRQHQVQSVHWNEEYGINEQRRDDATRAMLEK 119
            +L +  IPL +   + +  + + +   C Q QV  + +N +Y INE++RD A    L  
Sbjct: 64  AALAEKGIPLHVEQAEDFAASVKRLASFCGQQQVTHLFYNYQYEINERQRDAAVENTLAG 123

Query: 120 SAIQAHSHLDQLFFRPGTVLTRSGDYFQVFSQFKKTCLEHLHRSLP--ALARRVKRQAPL 177
              Q     D +   PG+VLT + + ++VF+ FK   L  L  +LP    A +V+   P+
Sbjct: 124 VTCQGFD--DSVLLPPGSVLTGNREMYKVFTPFKNAFLRRLQEALPECVAAPKVRASGPI 181

Query: 178 NIGSDPIPQHVEGFGKTTPALRDHWPAGEAEAQSRLSRFLDETIDDYHHLRDLPAKPGTS 237
              S+     VE     TP   + + A E  A +RL  F  +   DY   RDLPA  GTS
Sbjct: 182 AAASN-----VEIDYPQTPFDSELFAADEKSAIARLRGFCQQKAADYEQQRDLPAVEGTS 236

Query: 238 QLSPYLAAGVISPRQCLHGALAGNRGEFDSGSTGVQTWINELLWREFYKHILSGYPQVSR 297
           +LSP LA G +SPRQCLH  L       D  +  V  W+NEL+WREFY+H++  YP + +
Sbjct: 237 RLSPCLAVGALSPRQCLHRLLVEQPRALDGEAGAV--WLNELIWREFYRHLMVYYPNLCK 294

Query: 298 HRAFRAQTEALPWRDAPADLAAWEQGRTGFPIIDAAMRQLLHTGWMHNRLRMVVAMFLSK 357
            R F   T+ + W D  + L AW++G+TGFPI+DAAMRQL  TGWMHNRLRM+VA FL K
Sbjct: 295 GRPFIGWTDNVAWLDDKSALQAWQRGQTGFPIVDAAMRQLNTTGWMHNRLRMIVASFLVK 354

Query: 358 NLLIDWRKGERHFMRHLIDGDLAANNGGWQWSASTGTDAVPYFRIFNPVSQSQRFDPQGR 417
           +L IDWR GER+F+  LIDGDLAANNGGWQW+ASTGTDA PYFRIFNP +Q +RFD  GR
Sbjct: 355 DLRIDWRLGERYFIEQLIDGDLAANNGGWQWAASTGTDAAPYFRIFNPTTQGERFDKAGR 414

Query: 418 FIRHWVPELQELDEKAIHQPIKSTDLFG-NTSYLSPIVDLSSSRQRALEAFK 468
           FIRHW+PEL  + EKA+HQP    +  G    Y  PIVD   +R   L A++
Sbjct: 415 FIRHWLPELAGVPEKAVHQPWLWAEKQGVKLDYPRPIVDHKQARLETLAAWE 466