Pairwise Alignments

Query, 480 a.a., deoxyribodipyrimidine photolyase from Pseudomonas putida KT2440

Subject, 499 a.a., deoxyribodipyrimidine photo-lyase from Burkholderia phytofirmans PsJN

 Score =  262 bits (669), Expect = 2e-74
 Identities = 188/494 (38%), Positives = 258/494 (52%), Gaps = 40/494 (8%)

Query: 3   LTWLRSDLRIDDNTALSASTER----------GPTIALWLVSPGQWQA-HDDA---DCKV 48
           L W R DLR  DN AL  + +             TI   LV    WQA H D    D ++
Sbjct: 15  LVWFRRDLRSTDNAALYYALKHCERVWCVFVFDTTILQPLVEA--WQARHPDTQPQDRRI 72

Query: 49  DFWLRNLHDLRQSLEKLNIPLLIRTIDTWDQAPQAVLDICRQHQVQSVHWNEEYGINEQR 108
           +  L  L +L ++L      L++   D  D  P+   ++     V +V  N +Y      
Sbjct: 73  ELILGALGELDEALRANGGGLIVLYGDPADLVPKLADEL----GVDAVFANHDYEPVAIA 128

Query: 109 RDDATRAMLEKSAIQAHSHLDQLFFRPGTVLTRSGDYFQVFSQFKKTCLEHLH----RSL 164
           RD+  R  L ++  Q  +  DQ+ F    VLT     F VF+ +K   L+ L     +  
Sbjct: 129 RDETVRETLAEAGRQWLTFKDQVIFERDEVLTGQNKPFTVFTPYKNAWLKQLTAFDLKPY 188

Query: 165 PALARRVKRQAPLNIGSDPIPQHVE-GFGKTTPALRDHWPAGEAEAQSRLSRFLDETIDD 223
           P  +      AP +     +P   + GF  +  A  D  PAG + AQ  L  F    ID 
Sbjct: 189 PVESYTKHLAAPPSKLDRRLPTLDQLGFAPSNLAELD-LPAGMSGAQRLLDDFATR-IDS 246

Query: 224 YHHLRDLPAKPGTSQLSPYLAAGVISPRQCLHGALAGNRGEFDSGSTGVQTWINELLWRE 283
           Y   RD PA  G S LS +L  G +S R     A   +      GST   TW++EL+WR+
Sbjct: 247 YKDRRDFPAAKGPSYLSIHLRFGTVSIRTLARLAHEMSLQPDGEGST---TWLSELIWRD 303

Query: 284 FYKHILSGYPQVSRHRAFRAQTEALPWRDAP-AD--LAAWEQGRTGFPIIDAAMRQLLHT 340
           FY  IL+ +P+++   +F+ + + L W   P AD   AAW  GRTG+P++DAAM QL  T
Sbjct: 304 FYFMILAHHPRLANGASFKEEYDQLRWEQGPEADEAFAAWCDGRTGYPLVDAAMLQLNRT 363

Query: 341 GWMHNRLRMVVAMFLSKNLLIDWRKGERHFMRHLIDGDLAANNGGWQWSASTGTDAVPYF 400
           G+MHNRLRMV A FL K+L +DWR GER+F + L D D +ANNGGWQW+ASTG DA PYF
Sbjct: 364 GYMHNRLRMVTASFLVKDLGVDWRLGERYFAQQLNDFDFSANNGGWQWAASTGCDAQPYF 423

Query: 401 RIFNPVSQSQRFDPQGRFIRHWVPELQELDEKAIHQP-IKSTDL---FG---NTSYLSPI 453
           RIFNP++QS++FD +GRFI+ ++P+L  L  K IH P +  T+    FG      Y +PI
Sbjct: 424 RIFNPITQSEKFDAEGRFIKRYLPQLARLPSKWIHAPWLAGTERLAEFGVVLGKDYPAPI 483

Query: 454 VDLSSSRQRALEAF 467
           VD + +R R L  F
Sbjct: 484 VDHAEARARTLARF 497