Pairwise Alignments

Query, 504 a.a., Outer membrane efflux protein from Pseudomonas putida KT2440

Subject, 474 a.a., efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family from Pseudomonas stutzeri RCH2

 Score =  177 bits (450), Expect = 6e-49
 Identities = 136/466 (29%), Positives = 215/466 (46%), Gaps = 18/466 (3%)

Query: 8   LGLLMVLAGCTQVGPDFEKPQAPWLDGWSTPMIEQAGRSAAAPDLRQWWAVFADSTLDAL 67
           L L   L GC+ + P++++P AP    W        G + A+     W   F D  L  L
Sbjct: 8   LALAAALGGCSLI-PEYQRPDAPVAGDWPQGEAYPQGAAQASERALGWREFFRDPALQQL 66

Query: 68  IAEADANNTNLRVAGLRIAEARAQLAIVQTGRYPQLQQLSAQSLYLKQDQSG--TPSARD 125
           I  A  NN +LRVA L +   RA   + +  R   L  +SA     +    G    +   
Sbjct: 67  IEVALENNRDLRVAALNVDAYRA---LYRVQRADVLPAVSADGSGTRSRTPGDMNMTGEP 123

Query: 126 SVFWQSSVGFDIGWEIDFWGRFSRAIESADAVYFASQANYADAMLLLRAQVADTYFALRT 185
           ++  Q S  F + WE+D +GR     + A   YFAS+A      + L A VA+ +  L+ 
Sbjct: 124 AISSQYSATFGVSWELDLFGRLRSLRDQALEEYFASEAAQRSTQISLIASVANAWLTLQA 183

Query: 186 AEARLAIAQENAKRQARSLEITERLFRHGENDELDWQQARTQYLATLATIPEFENQLNAL 245
            +A L + ++  K    SL +T+R F  G    L+ +QAR+   +   +I ++   +   
Sbjct: 184 DQALLQVTRDTLKTYEESLGLTQRSFDVGVASALELRQARSAVDSARVSIEQYTRLVAQD 243

Query: 246 RNILCSLLGRP-PGPLPQLEAGHGQLPLPNRAVLQDVPASLLQRRPDIRAAEQAVAAQSA 304
           RN L  LLG+  P  LP   +G G       A+   +P+ LLQ+RPDI  AE  + A +A
Sbjct: 244 RNALTLLLGQSLPAGLP---SGDGLERTQLAALPIGLPSDLLQQRPDILQAEYQLRAVNA 300

Query: 305 LVGVAEADLYPQLSLLGSIGWTFLSANHLPDTFDLAAG-----PSLIWNPFDYGRRKNTV 359
            +G A A  +P++SL G+ G    +++ L   FD  +G     PS+    F+ G+ +  +
Sbjct: 301 SIGAARAAFFPRISLTGAAG---TASSELSGLFDGGSGYWSFSPSISVPIFNAGQLRANL 357

Query: 360 RVEDARLQQLIELYQQGVREAAREADDAASGLVRSLQSATIREQASQAAQRSLNLASSQY 419
                     +  Y++ ++ A RE  D  +      +    +    Q ++   NLA  +Y
Sbjct: 358 DYAQISKNIQVAQYEKAIQTAFREVADGLAAQATYTRQVQAQRDLLQTSEDYYNLAERRY 417

Query: 420 REGFADFQRVLDAQQLLLQQQDGYLVSRGNAVSSLVTLYKALGGGW 465
           R G   +  VLDAQ+ L   Q   +  R   ++S V L+KALGGGW
Sbjct: 418 RTGVDSYLTVLDAQRQLFNVQQQLIGDRLAQMTSEVNLFKALGGGW 463