Pairwise Alignments

Query, 504 a.a., Outer membrane efflux protein from Pseudomonas putida KT2440

Subject, 511 a.a., efflux transporter, outer membrane factor lipoprotein, NodT family from Dechlorosoma suillum PS

 Score =  249 bits (637), Expect = 1e-70
 Identities = 171/493 (34%), Positives = 247/493 (50%), Gaps = 19/493 (3%)

Query: 8   LGLLMVLAGCTQV--GPDFEKP--QAPWLDGWSTPMIEQAGRSAAAPD-------LRQWW 56
           L L   L GCT     PD E+   Q    + W  P   +A  +A A         L QWW
Sbjct: 20  LALAGSLGGCTLFTPAPDLEQRRLQLSVPEQWQGPAPARAETTAEATTEADEAAVLAQWW 79

Query: 57  AVFADSTLDALIAEADANNTNLRVAGLRIAEARAQLAIVQTGRYPQLQ-QLSAQSLYLKQ 115
             F D  LD LIA+  + + +LR A  ++  ARA   +     YP L     A       
Sbjct: 80  TRFNDPLLDQLIAQGLSASPDLRSAQAKLRSARASRDLAAADYYPGLSASTGATGSKASP 139

Query: 116 DQSGTPSARDSVFWQSSVGFDIGWEIDFWGRFSRAIESADAVYFASQANYADAMLLLRAQ 175
             SG  S R +++     GFD  WE D +G   + + +ADA   A  A    A + L  +
Sbjct: 140 AVSGGSSRRTTIY---DAGFDASWEPDIFGVVRQDVSAADADVAAQAATLEYARVTLVGE 196

Query: 176 VADTYFALRTAEARLAIAQENAKRQARSLEITERLFRHGENDELDWQQARTQYLATLATI 235
           VA  Y  LRT + RL IA++NA  QA +LEIT+   + G   ELD +QART    T ATI
Sbjct: 197 VARNYVELRTYQERLQIARDNASSQADTLEITQWRQQAGLATELDVEQARTSLEQTRATI 256

Query: 236 PEFENQLNALRNILCSLLGRPPGPLPQLEAGHGQLPLPNRAVLQDVPASLLQRRPDIRAA 295
           P   + + A +N L  LLG+ PG L +       LP   R +   +PA  L+RRPD+RAA
Sbjct: 257 PALVSNVAASQNRLAVLLGQTPGSLQERLGSARPLPAAPREIAVGIPADALRRRPDVRAA 316

Query: 296 EQAVAAQSALVGVAEADLYPQLSLLGSIGWTFLSANHL--PDTFDLAAGPSLIWNPFDYG 353
           E+ +AA++A V    A+ YP  +L GS GW  L++  L    T   +   +L    FD G
Sbjct: 317 ERTLAAETARVHARVAERYPSFTLSGSFGWQALTSGALGGSGTVARSLAGTLAAPLFDGG 376

Query: 354 RRKNTVRVEDARLQQLIELYQQGVREAAREADDAASGLVRSLQSATIREQASQAAQRSLN 413
           R K+ + V+DA  +Q +  Y+Q +  A  + ++A +      +    R +A++AA+ +  
Sbjct: 377 RLKSRIAVQDAAQEQALIAYEQKILTALEDTENALAAYAAGREQEATRRRAAEAARNAAQ 436

Query: 414 LASSQYREGFADFQRVLDAQQLLLQQQDGYLVSRGNAVSSLVTLYKALGGGWDASRAPID 473
           LA   Y+ G  DFQ+VLD ++  L  +D    ++   +S+++ LYKALGGGW A  AP D
Sbjct: 437 LARQMYQAGLTDFQKVLDTERTRLSAEDSLATAQLAVLSAVIQLYKALGGGWSAPEAPAD 496

Query: 474 --PATRQQMQQRT 484
              AT    Q++T
Sbjct: 497 AIAATPLSTQEKT 509