Pairwise Alignments

Query, 504 a.a., Outer membrane efflux protein from Pseudomonas putida KT2440

Subject, 461 a.a., copper/silver efflux system outer membrane protein CusC (RefSeq) from Shewanella sp. ANA-3

 Score =  170 bits (430), Expect = 1e-46
 Identities = 133/473 (28%), Positives = 217/473 (45%), Gaps = 37/473 (7%)

Query: 8   LGLLMVLAGCTQVGPDFEKPQAPWLDGWSTPMIEQAGRSAAAPDLRQ-----WWAVFADS 62
           +  + +L GC  + P++++P AP       P      R++  P +       W   F D 
Sbjct: 9   ISTIFILTGCVSLAPEYQRPAAP------VPQQFSLSRNSLMPAVNGYQDTGWRNFFVDP 62

Query: 63  TLDALIAEADANNTNLRVAGLRIAEARAQLAIVQTGRYPQLQQLSA--QSLYLKQDQSGT 120
            +  LI EA ANN NLR+A L++ EARAQ  +    RYPQL   S    S  LK D+  T
Sbjct: 63  QVTRLIGEALANNRNLRMAALKVEEARAQFNVTDADRYPQLNASSGITYSGGLKGDKPTT 122

Query: 121 PSARDSVFWQSSVGFDIGWEIDFWGRFSRAIESADAVYFASQANYADAMLLLRAQVADTY 180
                    +   G ++ +E+DF+G+     ++    YFAS+       +LL + V+ +Y
Sbjct: 123 Q--------EYDAGLELRYELDFFGKLKNLSDADRQNYFASEEARRAVHILLVSSVSQSY 174

Query: 181 FALRTAEARLAIAQENAKRQARSLEITERLFRHGENDELDWQQARTQYLATLATIPEFEN 240
           F+ + A  +L IA+E  K   +S    E+    G  + L  +QAR Q  +T A I + E 
Sbjct: 175 FSQQLAYEQLRIARETLKNYEQSYAFVEQQLVTGSTNVLALEQARGQIESTRAEIAKREG 234

Query: 241 QLNALRNILCSLLG--RPPGPLPQLEAGH-GQLPLPNRAVLQDVPASLLQRRPDIRAAEQ 297
            L    N L  +LG  R   P   ++ G    + LP+     ++ + +L +RPDI  AE 
Sbjct: 235 DLAQANNALQLVLGTYRALPPEKGMKGGETAPVKLPS-----NLSSQILLQRPDIMEAEY 289

Query: 298 AVAAQSALVGVAEADLYPQLSLLGSIGWTFLSANHLPDTFDLAAG-----PSLIWNPFDY 352
            + A  A +G A A  +P ++L   +     S+  L   F   +G     P +    F+ 
Sbjct: 290 QLKAADANIGAARAAFFPSITLTSGLS---ASSTELSSLFTPGSGMWNFIPKIDIPVFNA 346

Query: 353 GRRKNTVRVEDARLQQLIELYQQGVREAAREADDAASGLVRSLQSATIREQASQAAQRSL 412
           GR K  +++ + R QQ +  Y+Q ++ A ++  D  +      Q    +++   + Q +L
Sbjct: 347 GRNKANLKLAEIRQQQSVVNYEQKIQSAFKDVSDTFALRDSLSQQLESQQRYLDSLQITL 406

Query: 413 NLASSQYREGFADFQRVLDAQQLLLQQQDGYLVSRGNAVSSLVTLYKALGGGW 465
             A   Y  G   +  VLDA++ L   Q   L    +   + + L+ ALGGGW
Sbjct: 407 QRARGLYASGAVSYIEVLDAERSLFATQQTILDLTYSRQVNEINLFTALGGGW 459