Pairwise Alignments

Query, 365 a.a., Transporter, PerM family from Pseudomonas putida KT2440

Subject, 373 a.a., membrane protein, putative (NCBI ptt file) from Shewanella oneidensis MR-1

 Score = 84.7 bits (208), Expect = 4e-21
 Identities = 84/369 (22%), Positives = 160/369 (43%), Gaps = 29/369 (7%)

Query: 8   DSALSRGLLDVLIKAGLVAALVIFAFQVFQPFLELMLWAVILAVTLYPLHCRIQHRTGLK 67
           ++A+ R LL +L+ AG+           F  FL   L A+I+  + +PL+ ++  + G +
Sbjct: 7   NAAVGRTLLILLLCAGVF---------FFIDFLVPALAALIICFSSWPLYKKLLVKCGGR 57

Query: 68  QGYAATLVVLLVLVLLLVPIYLV----VMSIGESVDSLVTLLKSGAWSVPVPPDSVAAWP 123
              AA++ ++L+++ L+ P+  V    +  I    + LV   + GA   PVP   +   P
Sbjct: 58  SAVAASIALVLIVLGLITPLIFVFSYALQEIRIWAEWLVYANQHGA---PVPL-WIKDLP 113

Query: 124 LIGPKVHALWLAASENMASVLNQWMPQIKGAGLT-----VLGAAASAGGAFLLFIGAIII 178
            +G  +   W          L Q +  I G  LT     VL    +  G  L  +  +I 
Sbjct: 114 WVGEWLTLQWQQFIGEPHE-LGQIVSAISGQNLTGISRWVLQLGWNTLGLLLTLLFMLIT 172

Query: 179 SGVIMAFGERGEIATQRIAMRVSGAERGKPLATLCTATIRAVAQGVIGIAFIQMLLIGVG 238
              +   GE        +  R+  A R    + +  AT+ +   G+  IA  + +++G+ 
Sbjct: 173 LFFLYKDGESVAKQVDVVGERILPA-RWYRFSRVVPATVSSTVIGMTLIAIGEGIVLGIA 231

Query: 239 FVVKGVPGAGMLAIVILMLGIAQAPATLVTLPVIIYVFNAEGFTVATIIFAIYTFVAGLA 298
           + + GVP A    ++   + +    A  +   + +Y+      T    +F   +    + 
Sbjct: 232 YWIAGVPSAVAFGVLTAFMALIPGGAPTMFTLISLYLVGTGDMTAGVGLFLWGSIELFIV 291

Query: 299 DNVLKPLLLGRGVDVPMPVVLIGALGGMVVKGIIGLFIGPVILGVTYVLFWQWV-----A 353
           D  L+P L+G  + +P      G +GG+   G +GLF+GPV++ +   ++ +W+      
Sbjct: 292 DKTLRPNLVGGPIKLPFLPTFFGLIGGVKTMGFVGLFVGPVLMALLVAIWREWLRDDPDT 351

Query: 354 LQVPEQPAP 362
             +PE  AP
Sbjct: 352 FVMPESLAP 360