Pairwise Alignments

Query, 171 a.a., RNA polymerase sigma-70 factor, ECF subfamily from Pseudomonas putida KT2440

Subject, 160 a.a., Sigma-70 factor FpvI (ECF subfamily), controling pyoverdin biosynthesis from Pseudomonas fluorescens FW300-N1B4

 Score = 88.2 bits (217), Expect = 6e-23
 Identities = 56/161 (34%), Positives = 92/161 (57%), Gaps = 6/161 (3%)

Query: 15  LYQSHHTWLRGWLRSRVGCSEHAADLAQDTFVRLLRARQMSPLKEPRAYLSSIARGLMID 74
           + ++++  L  +L +++G  + A D+  D ++R+L     +P+++PRA+L   A  L+ID
Sbjct: 1   MLENYYRELVYFLNAKLGNRQVAEDVVHDAYLRVLERSSDTPIEQPRAFLYRTALNLVID 60

Query: 75  QFRRRALERAYQEGLAHLPEAE---VPSEEDKLVILDSLERLDRALQQLKPRVRQAFLLA 131
             RR AL +   E L  L   E    PS  + L     L+ L RAL +L    R++FLL 
Sbjct: 61  DHRRNALRQV--ESLDVLDSEERYFTPSPHNSLDHGQRLDMLQRALAELPKLCRESFLLR 118

Query: 132 QLDGLSIVQVAQRLGVSRATVERDLAKALGAC-YRLRYADA 171
           ++DGLS  ++A+ LG+SRA VE+ +  A+  C  R+R  DA
Sbjct: 119 KIDGLSHPEIAEHLGISRALVEKHIVNAMKHCRVRMRQWDA 159