Pairwise Alignments

Query, 171 a.a., RNA polymerase sigma-70 factor, ECF subfamily from Pseudomonas putida KT2440

Subject, 171 a.a., RNA polymerase sigma factor, sigma-70 family from Dechlorosoma suillum PS

 Score =  122 bits (307), Expect = 2e-33
 Identities = 68/156 (43%), Positives = 97/156 (62%), Gaps = 2/156 (1%)

Query: 15  LYQSHHTWLRGWLRSRVGCSEHAADLAQDTFVRLLRARQMSPLKEPRAYLSSIARGLMID 74
           LY+SHH WL GWLR + GC +HAADL QDTF++LL   +M  L+EPRAYL   A  L+I+
Sbjct: 13  LYRSHHGWLFGWLRKKTGCRDHAADLTQDTFLKLLALPEMPALREPRAYLLVTANRLLIN 72

Query: 75  QFRRRALERAYQEGLAHLPEAEVPSEEDKLVILDSLER--LDRALQQLKPRVRQAFLLAQ 132
             +R  +ER   + L  L E +     + +V +  L R  L    ++L+ + R+AFLLA+
Sbjct: 73  LHQRSRVERETLQALVLLLEPDSEPSPEHIVAMRQLLRQVLLMLSEELEEKPRRAFLLAR 132

Query: 133 LDGLSIVQVAQRLGVSRATVERDLAKALGACYRLRY 168
           L+GLS   +A  L VS ++V++ LAKAL  C+   Y
Sbjct: 133 LEGLSYADIAAELQVSESSVKQYLAKALAHCHGRLY 168