Pairwise Alignments

Query, 328 a.a., putative Transmembrane sensor from Pseudomonas putida KT2440

Subject, 329 a.a., sugar ABC transporter substrate-binding protein from Pseudomonas fluorescens FW300-N2E3

 Score =  108 bits (270), Expect = 2e-28
 Identities = 90/322 (27%), Positives = 145/322 (45%), Gaps = 25/322 (7%)

Query: 29  PDPQQEALAWFSLLR-QPGCDETQRQAFAAWCQVQE-NAHAYAELETFWQQLQPAPARP- 85
           P  +Q ALAW SLL+ QP   +     F  W Q    +A AYA  +  W+ +  APAR  
Sbjct: 11  PAQEQVALAWLSLLQDQPSSGD--HATFGRWLQADPAHAEAYARAQVVWE-MSEAPARTL 67

Query: 86  ----------------RPRHVTVRRSHLGKGLALAFLLGLA-AAAYLYWPLMQRLASELH 128
                           R R   VRR   G  +A   LL ++  A +        L ++  
Sbjct: 68  ADEDAFALQGYLNAMQRSRRSGVRRWSGGLAMAACLLLMVSIGAGWQPSRWFDDLTADYV 127

Query: 129 TDVGERRSIRLADGTTLNLDSASAMNVDLRGRTRQLHLVQGQVHLEVVLDGRAMDVEVGN 188
           +  GE R++ LAD + + LD+ SA+ VD     R + L +G     V   G    V+   
Sbjct: 128 SAPGEVRNVTLADQSRVILDADSAIAVDFSHGERHVRLRRGAAFFNVSHTGEPFVVDAEK 187

Query: 189 ARIQVYGTRLQIARHAGRDELVVFSGKAMVT--QGGEQRMVSAGERVTFDDTRIDPVRKA 246
              +V GT+ ++       ++ V SG+  VT  +G EQ++++AG++V +       +   
Sbjct: 188 GEARVLGTQFEVRLQPAGVQVTVLSGRVGVTPTKGAEQQVLTAGQQVAYGAGSAAKLHAV 247

Query: 247 DLKTADSWRNGRLKATDMPLRQVLERLAGYQGQRLWMMDEQVAHRRVSGDFNLDQPGQSL 306
           D +   +WR G L     PL  V++ L  Y   R+ ++++ +A RR+SG F    P   L
Sbjct: 248 DSEAQLAWRQGWLNYYKSPLADVVKDLDRYYPGRIVVLNDDLAARRISGSFPSKDPQAVL 307

Query: 307 QSLAAAQQLQLLGVLGHWLVVR 328
            SL      +   +LG  +++R
Sbjct: 308 DSLQGVLGFEQHSLLGRVIILR 329