Pairwise Alignments

Query, 1276 a.a., Sensory box protein from Pseudomonas putida KT2440

Subject, 1092 a.a., Sensory box/GGDEF family protein from Pseudomonas fluorescens FW300-N2E2

 Score =  420 bits (1079), Expect = e-121
 Identities = 307/941 (32%), Positives = 471/941 (50%), Gaps = 53/941 (5%)

Query: 344  ITEVNQVARQLLNIDCHEGAWQRLIDGTGDSRDSVGMQLIDALIEQRPLLELEVRLPTPQ 403
            I+E NQ    L     H+   +  ++          ++L++ +  +  L  +EV L    
Sbjct: 181  ISEANQYFESLFGWPLHDVIGRTTLELGLWVDPGQRVKLLEVIKARGELASMEVELRASN 240

Query: 404  GTELHLWLMARLPLQRRDYQAVILSISDITSRKQVELSLLERESFWSDVVRTVPDQLYVQ 463
            G ++H  L++   ++      ++ +  D T  K  E +L + +      + +     +  
Sbjct: 241  G-QIHTGLLSAQKVELEGQPYLLSTFLDTTEHKLAEQALKDSQERLDLALDSAQLGTWDW 299

Query: 464  DVPSQRMIFSNRHLGQTLGYDRTELAQMGDRFWELLLHPEDAAHYQALRRQQRDNCHDQP 523
             +PS  M++ +    Q  G +     +  D F+E +   E      A R  +     +  
Sbjct: 300  HIPSG-MLYGSARAAQLHGLEPKPFHESFDAFFEGVPTEERNNMRNAYRSLREGPAGNYQ 358

Query: 524  LHCQLRFRHRDGSWRCYDIREQVLTRNAEGLVTRIIGVGKDVTVQIEASQSLRDSEQRYR 583
            L    R +  DGS R  + R + L RN +G   R+ G   D+T Q+E  QSL  SE+++ 
Sbjct: 359  L--TYRVQLPDGSSRYLESRAR-LYRNDDGSPLRMAGTLLDITDQVEREQSLAASEEKFA 415

Query: 584  MLAESISDVIFSTDNQL-KLNYVSPSVQSVLGYQADWIFANGWQSIVANPAQLTGIY--- 639
             L +   D I  T     +   ++ S     G+ A          ++   A   G++   
Sbjct: 416  TLFQVSPDPICVTHQDSGRFLEINSSFTQTFGWTAS--------DVIGLDADEIGLWDAS 467

Query: 640  -SLMERVSKAMGDPAQMAQLCSQLPTQLFLFDCLRADGRKIPIELRLVLVWDDDQRFEGV 698
             S ++R+ + + + +        L     +            I  R + V +       +
Sbjct: 468  GSSLQRIERVIREQS--------LNNVAIVVHHKNGQPLTCVISSRQINVGNQPC----I 515

Query: 699  LGVGRDISQQRRAEKDLRMA----ATVFEHSTSAILITD-PAGYIVQANEAFSRVSGYAV 753
            +   RDI+QQ+R+E  L+ +    A  F  S  AI IT+  +G  ++ N+ F R++GY  
Sbjct: 516  VTTLRDITQQQRSEAALKASEEKFAKAFHSSPDAITITELESGRYLEVNDGFCRLTGYRA 575

Query: 754  SEVLDQLP---GMLTVDEQQEG---HLRYVVKQLHQRGSWEGEVWLKRRDGDHYPAWVGI 807
             EV+       G+   ++Q+      LR   + +HQ      E+  + + G+     V +
Sbjct: 576  DEVIGHTVYEVGIWAEEKQRAALLAELRLKGRVVHQ------EMLGRNKRGEILTVEVSV 629

Query: 808  TAVLDDEGDLASYVCFFTDISERKASEQRIHRLAYYDALTHLPNRTLFQDRLYNALQQAE 867
              +  +E   A  +    D+S  + +E +I  LAY+D LT+LPNR L  DRL   +   +
Sbjct: 630  EPITLNE--TACLLLTARDVSLLRNAEAQIRHLAYHDPLTNLPNRALLMDRLSQQIALLK 687

Query: 868  RQKAWVVLMFLDLDRFKPINDSLGHAAGDRMLKDMALRLLACVDDDDTVARMGGDEFTLL 927
            R      L+FLDLD FK INDSLGH  GD +LK +  RL A V  +DTVAR+GGDEF +L
Sbjct: 688  RHNLRGALLFLDLDHFKHINDSLGHPVGDTVLKIITARLEASVRLEDTVARLGGDEFVVL 747

Query: 928  LQPRPTREMALNRAIHVAENILGSLV-RPFVLENREFFVTASIGIALSPQDGSELSQLMK 986
            L         +++ +    N L  L+  P  L+ +   VT SIGIAL P  GS  + L+K
Sbjct: 748  LSGLEGSRSDVSKQVQTLANTLRELLSEPMFLDGQRLQVTPSIGIALIPDHGSTPTDLLK 807

Query: 987  NADTAMYHAKERGKNNFQFYQAEMNASALERLELESDLRHAMEQNEFILYYQPQFSGDGK 1046
             AD A+Y AK+ G+N  Q +   M  +A ERL +E+DLR A+ + EF +++QPQ      
Sbjct: 808  RADIALYRAKDSGRNTSQMFHTTMQKAASERLRMETDLRLALARGEFSVHFQPQVDARDN 867

Query: 1047 RLTGAEALLRWRHPTRGLVPPGDFIPVIEELGLVVDVGDWVLREAS---RQLKAWHKAKV 1103
            R+ GAEAL+RW HP  G   P +FI V+E+ GL+++VG W+L EA    +QL A  K   
Sbjct: 868  RIIGAEALVRWHHPDLGAQSPNEFIKVLEDSGLILEVGTWILDEACDGFKQLIAKGKIDP 927

Query: 1104 RVPKVSVNISARQFSDGQLGTRIANILEESGLPPACLELELTESILMREVNEALQILASL 1163
            +   + VNIS RQF       RI N L   GLP + L+LE+TE I+++ +++ +  +  L
Sbjct: 928  QQFSLCVNISPRQFRQSDFVERIENSLVTHGLPFSLLKLEITEGIVIQNLDDTIAKMRRL 987

Query: 1164 KNLGLSIAVDDFGTGYSSLNYLKQFPIDVLKIDRTFVDGLPEGEQDAQIARAIIAMAHSL 1223
            K LG+S A+DDFGTGYSSL YLK+ P+D LKID++FV        DA+I RAI+AMA SL
Sbjct: 988  KKLGVSFAMDDFGTGYSSLTYLKRLPVDTLKIDQSFVRDATSDPNDAEIIRAIVAMARSL 1047

Query: 1224 NLAVIAEGVETHEQLEFLREHGCDEVQGYLFGRPMPAHQFE 1264
            NL +IAEGVET EQL FL+   C   QGYL  RP+P   FE
Sbjct: 1048 NLIMIAEGVETLEQLHFLQGLDCHLYQGYLHSRPLPLEAFE 1088



 Score = 43.1 bits (100), Expect = 1e-07
 Identities = 45/148 (30%), Positives = 74/148 (50%), Gaps = 13/148 (8%)

Query: 698 VLGVGRDISQQRRAEKDLRMA----ATVFEHSTSAILIT-DPAGYIVQANEAFSRVSGYA 752
           ++GV R+I+ QR  E+ LR +    AT+F  S + +L+T    G I +AN+ F  + G+ 
Sbjct: 136 MIGVIREITHQREREQALRSSEKRFATLFHLSPNMVLLTRQEDGMISEANQYFESLFGWP 195

Query: 753 VSEVLDQ--LPGMLTVDEQQEGHLRYVVKQLHQRGSWEGEVWLKRRDGDHYPAWVGITAV 810
           + +V+ +  L   L VD  Q   L  V+K   +  S E E  L+  +G  +   +    V
Sbjct: 196 LHDVIGRTTLELGLWVDPGQRVKLLEVIKARGELASMEVE--LRASNGQIHTGLLSAQKV 253

Query: 811 -LDDEGDLASYVCFFTDISERKASEQRI 837
            L+ +  L S    F D +E K +EQ +
Sbjct: 254 ELEGQPYLLS---TFLDTTEHKLAEQAL 278



 Score = 32.3 bits (72), Expect = 2e-04
 Identities = 35/133 (26%), Positives = 62/133 (46%), Gaps = 5/133 (3%)

Query: 464 DVPSQRMIFSNRHLGQTLGYDRTELAQMGDRFWELLLHPEDAAHYQALRRQQRDNCHDQP 523
           D+ S ++ +S R      G+D  +       + +LLL  + A   +A          +Q 
Sbjct: 47  DIDSGQISWS-RGTQALFGFDPRQPLPADVDYLDLLLPEDRARAVRAFHAAVAGAPLEQA 105

Query: 524 LHCQLRFRHRDGSWRCYDIREQVLTRNAEGLVTRIIGVGKDVTVQIEASQSLRDSEQRYR 583
           +H ++ +   DGS    +I   VL  +  G   R+IGV +++T Q E  Q+LR SE+R+ 
Sbjct: 106 MHHRIVWP--DGSLHWLEISGSVLP-DKHGR-PRMIGVIREITHQREREQALRSSEKRFA 161

Query: 584 MLAESISDVIFST 596
            L     +++  T
Sbjct: 162 TLFHLSPNMVLLT 174