Pairwise Alignments

Query, 1276 a.a., Sensory box protein from Pseudomonas putida KT2440

Subject, 1069 a.a., sensory box protein (RefSeq) from Shewanella amazonensis SB2B

 Score =  436 bits (1121), Expect = e-126
 Identities = 232/557 (41%), Positives = 349/557 (62%), Gaps = 7/557 (1%)

Query: 705  ISQQRRAEKDLRMAATVFEHSTSAILITDPAGYIVQANEAFSRVSGYAVSEVLDQLPGML 764
            + ++++  + L  AA VFE+S   I++TD   +I   N AFS+++GY++ EV  + P +L
Sbjct: 494  LKERKKYRQALVRAAAVFEYSAEGIMVTDADNHIELINPAFSQITGYSIEEVKGRNPSIL 553

Query: 765  TVDEQQEGHLRYVVKQLHQRGSWEGEVWLKRRDGDHYPAWVGITAVLDDEGDLASYVCFF 824
            +           + + L   G WEGE+W +R+DG+ YP ++ IT V DDEG +  ++  F
Sbjct: 554  SSHRNPPHLYDAMWESLRSTGKWEGEIWNRRKDGEVYPEYLAITLVRDDEGQIVHHIGLF 613

Query: 825  TDISERKASEQRIHRLAYYDALTHLPNRTLFQDRLYNALQQAERQKAWVVLMFLDLDRFK 884
             DIS RK  EQ I   A +D LT LPNR L  +RL + L+ AE     + +M LDLDRFK
Sbjct: 614  MDISRRKQYEQDIWYKANFDTLTDLPNRKLLSERLGHELKMAEHDGRKLAVMVLDLDRFK 673

Query: 885  PINDSLGHAAGDRMLKDMALRLLACVDDDDTVARMGGDEFTLLLQPRPTREMALNRAIHV 944
             IND+ GH  GD +LK +A RL   +   D +AR+GGDEF ++L PR  +E A+ +    
Sbjct: 674  YINDTQGHDCGDLLLKAVAKRLQTVMGSTDFIARLGGDEFVIVL-PRLAQEHAVEQ---Y 729

Query: 945  AENILGSLVRPFVLENREFFVTASIGIALSPQDGSELSQLMKNADTAMYHAKERGKNNFQ 1004
            A+ +L S+  PF +E     V+AS+GI L PQDG ++  L+ NA+TAMY AK+ G+N+F+
Sbjct: 730  AKRLLQSMGDPFKVEQGSMSVSASLGIGLYPQDGLDVETLLSNAETAMYGAKDEGRNHFK 789

Query: 1005 FYQAEMNASALERLELESDLRHAMEQNEFILYYQPQFSGDGKRLTGAEALLRWRHPTRGL 1064
            ++  EMN + +ERL +E DLR A+  +EF L+YQP    +   +T  EALLRW+ P +GL
Sbjct: 790  YFTQEMNLALIERLGMERDLRRAVANDEFCLFYQPVVDMESGEVTSLEALLRWQDPEQGL 849

Query: 1065 VPPGDFIPVIEELGLVVDVGDWVLREASRQLKAWHKAKVRVPKVSVNISARQ--FSDGQL 1122
            V P  FIPV E++GL+ ++G WV+ +A   L   H     +  +++N+SA Q       L
Sbjct: 850  VSPVRFIPVAEDMGLMGELGQWVMDKALADLARLHTLGFGL-SMAINVSACQCHCKRQSL 908

Query: 1123 GTRIANILEESGLPPACLELELTESILMREVNEALQILASLKNLGLSIAVDDFGTGYSSL 1182
              ++ + L   G+ P  L +E+TES+L+   +  L  L ++++LG +I +DDFGTGYSSL
Sbjct: 909  DEQLRSALSRHGIAPRHLHVEITESLLLDNSHHCLDTLNNIRDLGCAIYLDDFGTGYSSL 968

Query: 1183 NYLKQFPIDVLKIDRTFVDGLPEGEQDAQIARAIIAMAHSLNLAVIAEGVETHEQLEFLR 1242
            +YLK+FPI  +KID++FV+ LP  E DA + RAI+ M+ SL + ++AEG+E+ +Q  FL+
Sbjct: 969  SYLKKFPISAIKIDKSFVEQLPGCESDASLVRAIVNMSKSLGMKLVAEGIESKDQQAFLQ 1028

Query: 1243 EHGCDEVQGYLFGRPMP 1259
              G    QGYL+ RP+P
Sbjct: 1029 ALGSQFGQGYLYSRPLP 1045



 Score = 33.1 bits (74), Expect = 1e-04
 Identities = 31/159 (19%), Positives = 67/159 (42%), Gaps = 21/159 (13%)

Query: 564 DVTVQIEASQSLRDSEQRYRM-------LAESISDVIFSTDNQLKLNYVSPSVQSVLGYQ 616
           ++    EA   +    ++YR        + E  ++ I  TD    +  ++P+   + GY 
Sbjct: 482 EIAAMAEAMNKMLKERKKYRQALVRAAAVFEYSAEGIMVTDADNHIELINPAFSQITGYS 541

Query: 617 ADWIFANGWQSIVANPAQLTGIYSLMERVSKAMGDPAQMAQLCSQLPTQLFLFDCLRADG 676
            + +      SI+++      +Y  M    ++ G      ++ ++           R DG
Sbjct: 542 IEEVKGRN-PSILSSHRNPPHLYDAMWESLRSTGK--WEGEIWNR-----------RKDG 587

Query: 677 RKIPIELRLVLVWDDDQRFEGVLGVGRDISQQRRAEKDL 715
              P  L + LV DD+ +    +G+  DIS++++ E+D+
Sbjct: 588 EVYPEYLAITLVRDDEGQIVHHIGLFMDISRRKQYEQDI 626