Pairwise Alignments

Query, 1276 a.a., Sensory box protein from Pseudomonas putida KT2440

Subject, 855 a.a., Putative diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) (NCBI) from Rhodospirillum rubrum S1H

 Score =  488 bits (1257), Expect = e-142
 Identities = 283/745 (37%), Positives = 414/745 (55%), Gaps = 28/745 (3%)

Query: 523  PLHCQLRFRHRDGSWRCYDIREQVLTRNAEGLVTRIIGVGKDVTVQIEASQSLRDSEQRY 582
            P+      RH  GS R Y +R   L      L   ++ + +D+T Q+ A  +LR +E +Y
Sbjct: 110  PVRRIAHIRHISGSERVYSLRFSPLDNGPHPL---LVVITRDMTAQVAAENALRAAEGKY 166

Query: 583  RMLAESISDVIFSTDNQLKLNYVSPSVQSVLGYQADWIFANGWQSIVANPAQL----TGI 638
            R + E+  + I+ +        V+P++  + GY              A+PA+L    T I
Sbjct: 167  RAIFENAVEGIYQSTPDGTYLDVNPALARIYGY--------------ASPAELIAHFTDI 212

Query: 639  YSLMERVSKAMGDPAQMAQLCSQLPTQLFLFDCLRADGRKIPIELRLVLVWDDDQRFEGV 698
             S +       G+  ++ +   ++    F  +  R DG  I I      V   D      
Sbjct: 213  ASQLYVDGTKRGEFQRLMRETGEVRD--FTAEVWRCDGHTIWITENARCVRGPDNEVLYY 270

Query: 699  LGVGRDISQQRRAEKDLRMAATVFEHSTSAILITDPAGYIVQANEAFSRVSGYAVSEVLD 758
             G   DI+ QR++++ +R+   VF      I++ +    +   N AF  ++G    ++  
Sbjct: 271  EGTVEDITAQRQSQETMRLLGKVFTSIAEGIVLLERDLTVRTVNPAFEAMTGLLRQDMEG 330

Query: 759  QLPGMLTVDEQQEGHLRYVVKQLHQRGSWEGEVWLKRRDGDHYPAWVGITAVLDDEGDLA 818
            +   +      +   L  V  ++ + G W GE+W +RR+G  Y   + +TAV    G+  
Sbjct: 331  RPARLFASGLHENDFLATVAAEVDRAGLWRGEIWGERREGPPYSGEMTVTAVRTRAGETT 390

Query: 819  SYVCFFTDISERKASEQRIHRLAYYDALTHLPNRTLFQDRLYNALQQAERQKAWVVLMFL 878
             YV   TDI++RK  E+ I   A +D LTHLPNR L  DRL  A+ QA+R    V +MFL
Sbjct: 391  HYVAAITDITKRKRDEEHIRFQANFDMLTHLPNRHLIMDRLEQAMHQAQRTGRQVCVMFL 450

Query: 879  DLDRFKPINDSLGHAAGDRMLKDMALRLLACVDDDDTVARMGGDEFTLLLQPRPTREMAL 938
            DLDRFK INDS GH+AGD +LK  A RL  CV   D+V R+GGDEF ++L     +    
Sbjct: 451  DLDRFKQINDSYGHSAGDEVLKLTARRLRNCVRISDSVGRLGGDEFIVILSNVEDQ---- 506

Query: 939  NRAIHVAENILGSLVRPFVLENREFFVTASIGIALSPQDGSELSQLMKNADTAMYHAKER 998
            +   ++AE IL SL  PF +   E F   S+GI   P  G     L++NAD AMYHAK+ 
Sbjct: 507  HAGAYIAEKILYSLSEPFPIGGTEVFCIPSVGITYFPDHGETAPDLLRNADVAMYHAKQG 566

Query: 999  GKNNFQFYQAEMNASALERLELESDLRHAMEQNEFILYYQPQFSGDGKRLTGAEALLRWR 1058
            G+  +  +  +M   +L  L +ESDLRHA+ ++EF L++QP+   D   L GAEAL+RWR
Sbjct: 567  GERRYAIFTPDMARRSLALLTMESDLRHALARDEFELHFQPKVRAD-LTLIGAEALIRWR 625

Query: 1059 HPTRGLVPPGDFIPVIEELGLVVDVGDWVLREASRQLKAWHKAKVRVPKVSVNISARQFS 1118
            HP +GL+ PGDFIP+ EE GL++ +G W LREA  ++ +W    + +P VSVN+S RQF 
Sbjct: 626  HPEKGLINPGDFIPLAEESGLILPIGRWTLREACDRVMSWRAEGLTIPSVSVNVSPRQFQ 685

Query: 1119 DGQLGTRIANILEESGLPPACLELELTESILMREVNEALQILASLKNLGLSIAVDDFGTG 1178
            D  L   +  IL E+GL P  L+LE+TE+++  +V  A+  L +LK+LG+++++DDFGTG
Sbjct: 686  DQTLVETVRQILVETGLEPEALDLEITETVMTGDVEHAVGTLRALKDLGVTLSIDDFGTG 745

Query: 1179 YSSLNYLKQFPIDVLKIDRTFVDGLPEGEQDAQIARAIIAMAHSLNLAVIAEGVETHEQL 1238
            YSSLNYLK FPID LKID+TFV  +    +DA I   IIA+A +L  +V+AEGVE  EQ 
Sbjct: 746  YSSLNYLKTFPIDTLKIDQTFVRDVLHSGKDAAIVSTIIALARNLGFSVVAEGVEEIEQA 805

Query: 1239 EFLREHGCDEVQGYLFGRPMPAHQF 1263
            EFL    C   QG+L+ RP+P  +F
Sbjct: 806  EFLGSRDCQNFQGFLYSRPLPPAEF 830