Pairwise Alignments

Query, 1276 a.a., Sensory box protein from Pseudomonas putida KT2440

Subject, 879 a.a., PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein from Dechlorosoma suillum PS

 Score =  417 bits (1072), Expect = e-120
 Identities = 244/565 (43%), Positives = 337/565 (59%), Gaps = 14/565 (2%)

Query: 708  QRRAEKDLRMAATVFEHSTSAILITDPAGYIVQANEAFSRVSGYAVSEVLDQLPGMLTVD 767
            QR   +  RM   +   ++  I   D  G I   N A + + GY   E+L Q    +   
Sbjct: 169  QRNEARLNRMRQLILSSASEGIFGVDVEGRINFINPAATALLGYTEEELLGQDSHRMLHH 228

Query: 768  EQQEGHLRYVVKQ------LHQRGSW-EGEVWLKRRDGDHYPAWVGITAVLDDEGDLASY 820
               +G   Y V+       LH   +  + E  L  RDG   P     T +++D G +   
Sbjct: 229  SHIDGS-HYAVEDCPMHLCLHSGITIRDRESTLWHRDGTPLPLECSHTPIVED-GRIIGA 286

Query: 821  VCFFTDISERKASEQRIHRLAYYDALTHLPNRTLFQDRLYNALQQAERQKAWVVLMFLDL 880
            V    DI +RK   +++ R + YD LT LPNR L  DRL + ++   R    + ++ L+L
Sbjct: 287  VTTLRDIRDRKRYLEQLERHSNYDELTDLPNRNLLYDRLNHNIEVCRRSGMNIAVLTLNL 346

Query: 881  DRFKPINDSLGHAAGDRMLKDMALRLLACVDDDDTVARMGGDEFTLLLQPRPTREMALNR 940
            DRFK IND+LG AAGD++L+++A RL   V   DT+AR+ GDEF L+++     + +   
Sbjct: 347  DRFKSINDTLGRAAGDQVLREVAQRLGRQVRKMDTLARLEGDEFVLVVEVATAEQSSA-- 404

Query: 941  AIHVAENILGSLVRPFVLENREFFVTASIGIALSPQDGSELSQLMKNADTAMYHAKERGK 1000
                A+ IL +L  PF +  REFF++ SIGIA  P+DG    +L++NAD AMY AK +G 
Sbjct: 405  ---FAQPILKALANPFHVAEREFFLSGSIGIATFPKDGDNGEELLRNADAAMYKAKTKGG 461

Query: 1001 NNFQFYQAEMNASALERLELESDLRHAMEQNEFILYYQPQFSGDGKRLTGAEALLRWRHP 1060
            N FQFY AEMN  +LERL+LE+ LR A++Q E ++YYQPQ +     + GAEAL+RW+ P
Sbjct: 462  NRFQFYTAEMNQRSLERLDLENGLRRAIDQGELVVYYQPQVNLRNGAIIGAEALVRWQDP 521

Query: 1061 TRGLVPPGDFIPVIEELGLVVDVGDWVLREASRQLKAWHKAKVRVPKVSVNISARQFSDG 1120
             +GLV PG FI + EE GL+V +G+WVLR A  Q KAW  A +    V+VN+SARQF+  
Sbjct: 522  EKGLVMPGSFIALAEETGLIVPLGEWVLRTACSQNKAWQDAGLPKIPVAVNLSARQFAAQ 581

Query: 1121 QLGTRIANILEESGLPPACLELELTESILMREVNEALQILASLKNLGLSIAVDDFGTGYS 1180
             +    A IL ++GL P  LELELTES +M +    ++    LK L +++++DDFGTG+S
Sbjct: 582  DVVELAARILHDTGLAPNYLELELTESAVMADAEAFIRATEKLKGLSIALSIDDFGTGFS 641

Query: 1181 SLNYLKQFPIDVLKIDRTFVDGLPEGEQDAQIARAIIAMAHSLNLAVIAEGVETHEQLEF 1240
            SL+YLK+F ID LKID+TFV  +      A IA AII++AHSL L  IAEGVET  QL F
Sbjct: 642  SLSYLKRFAIDRLKIDQTFVRDITHDPDSASIALAIISLAHSLKLLAIAEGVETEAQLNF 701

Query: 1241 LREHGCDEVQGYLFGRPMPAHQFEA 1265
            LR   CDE+QGY F   +PA +FEA
Sbjct: 702  LRARNCDEMQGYFFSPALPADEFEA 726



 Score = 31.6 bits (70), Expect = 3e-04
 Identities = 12/55 (21%), Positives = 33/55 (60%)

Query: 561 VGKDVTVQIEASQSLRDSEQRYRMLAESISDVIFSTDNQLKLNYVSPSVQSVLGY 615
           V +++ +Q +  ++     +  +++  S S+ IF  D + ++N+++P+  ++LGY
Sbjct: 158 VAENLAIQEQGQRNEARLNRMRQLILSSASEGIFGVDVEGRINFINPAATALLGY 212