Pairwise Alignments

Query, 1276 a.a., Sensory box protein from Pseudomonas putida KT2440

Subject, 833 a.a., PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein from Dechlorosoma suillum PS

 Score =  507 bits (1305), Expect = e-147
 Identities = 267/568 (47%), Positives = 363/568 (63%), Gaps = 6/568 (1%)

Query: 697  GVLGVGRDISQQRRAEKDLRMAATVFEHSTSAILITDPAGYIVQANEAFSRVSGYAVSEV 756
            G++G   DI+ Q   E+ LR+ A +FEH++ A+++TD    ++  N+AF  ++G++ +EV
Sbjct: 264  GLIGYLVDITNQLEREEKLRLHAKIFEHNSEAVIVTDAMQRVLSVNKAFCDITGFSEAEV 323

Query: 757  LDQLPGMLTVDEQQEGHLRYVVKQLHQRGSWEGEVWLKRRDGDHYPAWVGITAVLDDEGD 816
               LP +L            +   L   G+W+GE+W +R++GD YP WV I++V +  G 
Sbjct: 324  RMSLPALLQPTRDDPNLAAEIQVALASSGAWQGELWDRRKNGDTYPVWVSISSVKNTRGI 383

Query: 817  LASYVCFFTDISERKASEQRIHRLAYYDALTHLPNRTLFQDRLYNALQQAERQKAWVVLM 876
            L+ Y   F+DISERK +E++I+RLAYYDALT LPNR+L    L  AL +A+R +    ++
Sbjct: 384  LSHYFLVFSDISERKEAERQIYRLAYYDALTGLPNRSLLFSLLEQALIEAQRNQTHGAVL 443

Query: 877  FLDLDRFKPINDSLGHAAGDRMLKDMALRLLACVDDDDTVARMGGDEFTLLLQPRPTREM 936
            F+DLDRFK INDS GHA  D +LK++A RL   +  +D VAR+GGDEF + L     RE 
Sbjct: 444  FVDLDRFKTINDSFGHAPADALLKEVARRLQETLRAEDVVARLGGDEFIVALFDITKRE- 502

Query: 937  ALNRAIHVAENILGSLVRPFVLENREFFVTASIGIALSPQDGSELSQLMKNADTAMYHAK 996
                A  V + IL +L  PF + + E  +TASIGIA+ P DG +   L++NADTAMY  K
Sbjct: 503  ---HAALVGQKILDALAEPFQIVHHEVLLTASIGIAVFPDDGRDAETLLRNADTAMYRVK 559

Query: 997  ERGKNNFQFYQAEMNASALERLELESDLRHAMEQNEFILYYQPQFSGDGKRLTGAEALLR 1056
            +       FY  EMN  +LERL+LE  LR A+E+ EF LYYQPQ      R+ GAEAL+R
Sbjct: 560  QTSGGPL-FYSQEMNLRSLERLKLEGALRKAVERQEFRLYYQPQVELATGRIVGAEALIR 618

Query: 1057 WRHPTRGLVPPGDFIPVIEELGLVVDVGDWVLREASRQLKAWHKAKVRVPKVSVNISARQ 1116
            W HP +G++PP  FIP+ EE GL+V +G WVL  A RQ + W +A      ++VN+S RQ
Sbjct: 619  WHHPEQGMIPPTAFIPLAEETGLIVSIGAWVLDAACRQGRLWREAGYEDLTIAVNLSPRQ 678

Query: 1117 FSDGQLGTRIANILEESGLPPACLELELTESILMREVNEALQILASLKNLGLSIAVDDFG 1176
            F  G L   +   LE    P   LELE+TE +LM      +Q+L      G+ +A+DDFG
Sbjct: 679  FRPG-LSQLVNETLERHAFPGENLELEITEGMLMHNSEAVIQMLEDFHQAGVRLALDDFG 737

Query: 1177 TGYSSLNYLKQFPIDVLKIDRTFVDGLPEGEQDAQIARAIIAMAHSLNLAVIAEGVETHE 1236
            TGYSSL YLK+FPID LKIDR+FV G+P    D+ IA+AII+MA +L L VIAEGVET E
Sbjct: 738  TGYSSLAYLKKFPIDNLKIDRSFVSGIPHDGDDSAIAKAIISMAKNLRLLVIAEGVETEE 797

Query: 1237 QLEFLREHGCDEVQGYLFGRPMPAHQFE 1264
            QL+FLR  GCDE+QGYLF  P+P   F+
Sbjct: 798  QLDFLRAAGCDEIQGYLFSPPVPVEDFQ 825



 Score = 42.7 bits (99), Expect = 1e-07
 Identities = 29/133 (21%), Positives = 63/133 (47%), Gaps = 7/133 (5%)

Query: 710 RAEKDLRMAATVFEHSTSAILITDPAGYIVQANEAFSRVSGYAVSEVLDQLPGMLTVDE- 768
           R E  +   + + +H   +++  D +GYI+  N+   R+ GY  +E + +    L  D+ 
Sbjct: 152 RMEAKVEEQSQILDHIHDSVITMDLSGYIMGWNKGAERLFGYTAAEAVGRHILFLYADDG 211

Query: 769 ----QQEGHLRYVVKQLHQRGSWEGEVWLKRRDGDHYPAWVGITAVLDDEGDLASYVCFF 824
               ++E  L Y        G  E EV  +++ G+ + A V ++   ++ G+ A  + + 
Sbjct: 212 SETLEEEDDLFY--NAFLDHGRREFEVRRRKKSGEVFWASVSLSLSRNEAGEPAGLIGYL 269

Query: 825 TDISERKASEQRI 837
            DI+ +   E+++
Sbjct: 270 VDITNQLEREEKL 282



 Score = 27.3 bits (59), Expect = 0.006
 Identities = 18/69 (26%), Positives = 33/69 (47%), Gaps = 4/69 (5%)

Query: 547 LTRNAEGLVTRIIGVGKDVTVQIEASQSLRDSEQRYRMLAESISDVIFSTDNQLKLNYVS 606
           L+RN  G    +IG   D+T Q+E  + LR     +  + E  S+ +  TD   ++  V+
Sbjct: 254 LSRNEAGEPAGLIGYLVDITNQLEREEKLR----LHAKIFEHNSEAVIVTDAMQRVLSVN 309

Query: 607 PSVQSVLGY 615
            +   + G+
Sbjct: 310 KAFCDITGF 318