Pairwise Alignments

Query, 1276 a.a., Sensory box protein from Pseudomonas putida KT2440

Subject, 874 a.a., PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein from Dechlorosoma suillum PS

 Score =  514 bits (1324), Expect = e-149
 Identities = 287/699 (41%), Positives = 401/699 (57%), Gaps = 29/699 (4%)

Query: 570  EASQSLRDSEQRYRMLAESISDVIFSTDNQLKLNYVSPSVQSVLGYQADWIFANGWQSIV 629
            ++   L   E+RY  L E     I   D +L + Y +    +++G   +           
Sbjct: 195  QSQAQLHSLEERYLRLLEFCPTGIIHYDTELHITYSNQQFANIIGVPLE----------- 243

Query: 630  ANPAQLTGIYSLMERVSKAMGDPAQMAQLCSQLPTQLFLFDC---LRADGRKIPIELRLV 686
                       L +     + D   +  L + L  +   F+        GR++ + L   
Sbjct: 244  ----------RLQDLDMAKLQDQRPLPALAAVLEGRTGRFEGEYRASLSGRQLWVSLVAA 293

Query: 687  LVWDDDQRFEGVLGVGRDISQQRRAEKDLRMAATVFEHSTSAILITDPAGYIVQANEAFS 746
             V D   +  G + +  D ++++RAE  LR  +   E S + I+ITD  G I   N  F+
Sbjct: 294  PVLDQGGQLLGGIAIVEDATERKRAELQLRQLSRAVEQSPATIVITDTNGVIEYVNPKFT 353

Query: 747  RVSGYAVSEVLDQLPGMLTVDEQQEGHLRYVVKQLHQRGSWEGEVWLKRRDGDHYPAWVG 806
            R +GY+  E +   P +L   E      + +   +   G WEG    +RR+G+ Y     
Sbjct: 354  RTTGYSAEEAVGLKPSVLKSGETPLEVYQELWSTIASGGQWEGVFHNRRRNGELYWEHAT 413

Query: 807  ITAVLDDEGDLASYVCFFTDISERKASEQRIHRLAYYDALTHLPNRTLFQDRLYNALQQA 866
            I+ + DD   +  +V    DI+E++  E RIH+LAY+D LT LPNRTL  DR+   L  A
Sbjct: 414  ISPITDDNQRITHFVAVKEDITEKRRQEDRIHQLAYFDELTGLPNRTLLHDRVSQCLAAA 473

Query: 867  ERQKAWVVLMFLDLDRFKPINDSLGHAAGDRMLKDMALRLLACVDDDDTVARMGGDEFTL 926
            ER++  + L+F+DLD FK +NDSLGH  GDR+L+ +A RL  CV D DTV+R+GGDEF +
Sbjct: 474  EREQETLALLFIDLDNFKTVNDSLGHFTGDRLLQSVAQRLKGCVRDSDTVSRLGGDEFVV 533

Query: 927  LLQPRPTREMALNRAIHVAENILGSLVRPFVLENREFFVTASIGIALSPQDGSELSQLMK 986
            +L      +  L+ A  VA  I+  + +PFV++  +  VT SIGI+L P D  +   L+K
Sbjct: 534  VLA-----DAQLDGASQVARKIIDRVGQPFVIDGHQLTVTPSIGISLFPHDARDFQSLLK 588

Query: 987  NADTAMYHAKERGKNNFQFYQAEMNASALERLELESDLRHAMEQNEFILYYQPQFSGDGK 1046
            NADTAMY AKE G+N +QF+ AEMN  A ERL LE+ LR A+E+ EF+L+YQPQ      
Sbjct: 589  NADTAMYQAKESGRNAYQFFTAEMNVLAFERLVLENALRQAVERQEFVLHYQPQVDMGSG 648

Query: 1047 RLTGAEALLRWRHPTRGLVPPGDFIPVIEELGLVVDVGDWVLREASRQLKAWHKAKVRVP 1106
            R+ GAEAL+RW HP  G+VPP  FIPV E+ GL+  +GDWVL EA RQ +AW +A +   
Sbjct: 649  RVIGAEALVRWLHPELGMVPPARFIPVAEDSGLIGAIGDWVLYEACRQNRAWQEAGLPAI 708

Query: 1107 KVSVNISARQFSDGQLGTRIANILEESGLPPACLELELTESILMREVNEALQILASLKNL 1166
             V+VN+SA Q    +L   +A +L  +GL    LELELTE  +M +    ++ L  L  +
Sbjct: 709  PVAVNLSAVQLRQSELHESVAELLRRTGLESRYLELELTERTVMEDAEATVRCLRRLDEM 768

Query: 1167 GLSIAVDDFGTGYSSLNYLKQFPIDVLKIDRTFVDGLPEGEQDAQIARAIIAMAHSLNLA 1226
            G+ +++DDFGTGYSSL+YLK+FPID LKID++FV  +     D  IA AII+M HSL L 
Sbjct: 769  GVMLSIDDFGTGYSSLSYLKRFPIDKLKIDQSFVRDIVADADDQAIAVAIISMGHSLRLR 828

Query: 1227 VIAEGVETHEQLEFLREHGCDEVQGYLFGRPMPAHQFEA 1265
            VIAEGVET EQLE L  HGCDE QG+ FGRPMPA +F A
Sbjct: 829  VIAEGVETAEQLEILHRHGCDEAQGFHFGRPMPADEFAA 867



 Score = 30.4 bits (67), Expect = 7e-04
 Identities = 36/161 (22%), Positives = 64/161 (39%), Gaps = 18/161 (11%)

Query: 559 IGVGKDVTVQIEASQSLRDSEQRYRMLAESISDVIFSTDNQLKLNYVSPSVQSVLGYQAD 618
           I + +D T +  A   LR   Q  R + +S + ++  TD    + YV+P      GY A+
Sbjct: 306 IAIVEDATERKRAELQLR---QLSRAVEQSPATIVI-TDTNGVIEYVNPKFTRTTGYSAE 361

Query: 619 WIFANGWQSIVANPAQLTGIYSLMERVSKAMGDPAQMAQLCSQLPTQLFLFDCLRADGRK 678
                  +++   P+ L    + +E   +     A   Q          +F   R +G  
Sbjct: 362 -------EAVGLKPSVLKSGETPLEVYQELWSTIASGGQWEG-------VFHNRRRNGEL 407

Query: 679 IPIELRLVLVWDDDQRFEGVLGVGRDISQQRRAEKDLRMAA 719
                 +  + DD+QR    + V  DI+++RR E  +   A
Sbjct: 408 YWEHATISPITDDNQRITHFVAVKEDITEKRRQEDRIHQLA 448