Pairwise Alignments

Query, 1276 a.a., Sensory box protein from Pseudomonas putida KT2440

Subject, 972 a.a., PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein from Dechlorosoma suillum PS

 Score =  515 bits (1326), Expect = e-150
 Identities = 275/684 (40%), Positives = 411/684 (60%), Gaps = 27/684 (3%)

Query: 585  LAESISDVIFSTDNQLKLNYVSPSVQSVLGYQADWIFANGWQSIV---ANPAQLTGIYSL 641
            +A ++++ I + D   ++ + +   +++LG     +      +++   A PA+++G+   
Sbjct: 293  IANTLAEGILALDRGGRITFANQRAEALLGAAPGGLLGRDAATVLWPGAAPAEVSGLARA 352

Query: 642  MERVSKAMGDPAQMAQLCSQLPTQLFLFDCLRADGRKIPIELRLVLV--WDDDQRFEGVL 699
            +   +   G+                  D +R+DG   P+ +    +   + D    G +
Sbjct: 353  LATGAVFEGED-----------------DFVRSDGSAFPVAVLGAPLRGGEGDADQAGYV 395

Query: 700  GVGRDISQQRRAEKDLRMAATVFEHSTSAILITDPAGYIVQANEAFSRVSGYAVSEVLDQ 759
               RDIS+ ++AE  L +AA VF+    A+++TD  G I   N AFS V+GY+ ++   +
Sbjct: 396  ASFRDISEIKQAEARLHLAARVFDSLGEAMVVTDARGRIQSVNPAFSEVTGYSEADARGR 455

Query: 760  LPGMLTVDEQQE-GHLRYVVKQLHQRGSWEGEVWLKRRDGDHYPAWVGITAVLDDEGDLA 818
             PG +    Q +      + + L ++G W+GEV  +R+ G+ YP W+ ITA+ D  G ++
Sbjct: 456  APGHILASGQHDPAFYAQMWQSLQEQGKWQGEVINRRKSGETYPEWLSITAIKDGAGQVS 515

Query: 819  SYVCFFTDISERKASEQRIHRLAYYDALTHLPNRTLFQDRLYNALQQAERQKAWVVLMFL 878
             YV  FTDI++RK +E  IH LAY+D LT LPNR LF DRL NAL+QA R +  + ++ L
Sbjct: 516  QYVGLFTDITDRKQAEAHIHHLAYHDPLTGLPNRRLFYDRLENALRQAHRSRRKLAVLLL 575

Query: 879  DLDRFKPINDSLGHAAGDRMLKDMALRLLACVDDDDTVARMGGDEFTLLLQPRPTREMAL 938
            DLDRFK +ND+LGH  GD +LK++  RL  C+ + DT+AR+GGDEF LLL       ++ 
Sbjct: 576  DLDRFKAVNDTLGHDQGDLLLKEVGARLSLCLREGDTLARLGGDEFVLLLP----EVLSA 631

Query: 939  NRAIHVAENILGSLVRPFVLENREFFVTASIGIALSPQDGSELSQLMKNADTAMYHAKER 998
              A  VA  +L    +P  L  RE F + SIGIAL P DG +   L+K+AD AMY AK+ 
Sbjct: 632  EDASIVAGKLLAQFDQPVRLGEREIFASTSIGIALYPADGEDGESLLKHADVAMYAAKDG 691

Query: 999  GKNNFQFYQAEMNASALERLELESDLRHAMEQNEFILYYQPQFSGDGKRLTGAEALLRWR 1058
            G+  ++F+ A  N  +LERLELE+DLR A+E  + +LYYQPQ      R+ G EAL+RWR
Sbjct: 692  GRAAYRFFIASHNERSLERLELENDLRRAVEGEQLLLYYQPQIGASSGRIAGVEALVRWR 751

Query: 1059 HPTRGLVPPGDFIPVIEELGLVVDVGDWVLREASRQLKAWHKAKVRVPKVSVNISARQFS 1118
            HPTRGLV P  FI + E  GL+  +G W L  A RQL+AW +  V VP+V+VN+SARQ  
Sbjct: 752  HPTRGLVMPDSFIALAENAGLIDAIGHWCLVAACRQLRAWQEQGVPVPRVAVNVSARQLR 811

Query: 1119 DGQLGTRIANILEESGLPPACLELELTESILMREVNEALQILASLKNLGLSIAVDDFGTG 1178
                   +  ++ +SG+ PA LELELTES L  +  + L I ++L+  G+ +++DDFGTG
Sbjct: 812  RWDFAQEVLQVVTQSGIDPAGLELELTESSLADDPEQILAIFSTLRQAGVRVSIDDFGTG 871

Query: 1179 YSSLNYLKQFPIDVLKIDRTFVDGLPEGEQDAQIARAIIAMAHSLNLAVIAEGVETHEQL 1238
            YSSL+YL ++P+D +KIDR+FV  L +  +   + RA+I +AH L +  +AEGVET  Q 
Sbjct: 872  YSSLSYLSRYPVDEVKIDRSFVSRLLDDREARSVVRAVILLAHGLGMRTVAEGVETEAQW 931

Query: 1239 EFLREHGCDEVQGYLFGRPMPAHQ 1262
            + L +  CDE+QGYLF +P+P HQ
Sbjct: 932  QVLSDLDCDELQGYLFSKPVPPHQ 955