Pairwise Alignments

Query, 1276 a.a., Sensory box protein from Pseudomonas putida KT2440

Subject, 878 a.a., diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) (RefSeq) from Shewanella sp. ANA-3

 Score =  456 bits (1174), Expect = e-132
 Identities = 243/617 (39%), Positives = 365/617 (59%), Gaps = 17/617 (2%)

Query: 657  QLCSQLPTQLFLFDCLRADGRK----IPIELRLVLVWDDDQRFEGVLGVGRDISQQRRAE 712
            +L  +  T + + +CL  DG K    + +E   +     +    GV+G+ R+IS+ +  E
Sbjct: 266  RLAIEAGTPIIVAECL--DGEKQNKHLWLETLKIPAMTSEGALAGVIGMTRNISKHKEVE 323

Query: 713  KDLRMAATVFEHSTSAILITDPAGYIVQANEAFSRVSGYAVSEVLDQLPGMLTVDEQQEG 772
            + L +A  VF+H+   ++ITD  G I   N AF  ++GY+  E+L Q P +      ++ 
Sbjct: 324  EQLTLATNVFKHTLEGVVITDRHGNITDVNGAFYEITGYSREELLGQNPRLFNSGRHEKA 383

Query: 773  HLRYVVKQLHQRGSWEGEVWLKRRDGDHYPAWVGITAVLDDEGDLASYVCFFTDISERKA 832
                +   L + G W GE+W +R+DG  +P  + I+ + D+ GD+  +V  F+DIS +K 
Sbjct: 384  FFDAMWNHLLETGKWNGEIWNRRKDGTIFPQNITISTIYDELGDVRYFVAVFSDISAQKQ 443

Query: 833  SEQRIHRLAYYDALTHLPNRTLFQDRLYNALQQAERQKAWVVLMFLDLDRFKPINDSLGH 892
            SE ++  LAY+D LTHLPNR     +L   L+ A+R  A +  +F+D+D FK INDS GH
Sbjct: 444  SEAQLAHLAYFDPLTHLPNRMKLMMQLKQELRHAKRLNAQLATVFIDVDLFKHINDSFGH 503

Query: 893  AAGDRMLKDMALRLLACVDDDDTVARMGGDEFTLLLQPRPTRE---MALNRAIHVAENIL 949
            + GD ML ++A RL + + + D ++R+GGDEF  L+    + E    A+N+   V E   
Sbjct: 504  SIGDEMLVELAKRLRSQLQEQDVLSRIGGDEFVALISGIQSHEDAAAAINQLRQVFE--- 560

Query: 950  GSLVRPFVLENREFF-VTASIGIALSPQDGSELSQLMKNADTAMYHAKERGKNNFQFYQA 1008
                +PFV+   +   +TAS+G+++ P DGS    L++NAD AMY AK  G+NNF FY  
Sbjct: 561  ----QPFVVSTGDHLRLTASMGVSIYPDDGSNADTLLRNADAAMYRAKSEGRNNFAFYTE 616

Query: 1009 EMNASALERLELESDLRHAMEQNEFILYYQPQFSGDGKRLTGAEALLRWRHPTRGLVPPG 1068
             +   + E L+L+S L  A+EQN   L YQP+     ++  G EALLRW  P  G + PG
Sbjct: 617  SLTKQSFEHLKLQSALYGALEQNALYLMYQPKLDLVSRKTIGVEALLRWNDPILGQISPG 676

Query: 1069 DFIPVIEELGLVVDVGDWVLREASRQLKAWHKAKVRVPKVSVNISARQFSDGQLGTRIAN 1128
             FIPV E++GL+ D+G WVL  A  Q   W        +++VN++ +Q         +  
Sbjct: 677  VFIPVAEKIGLIYDIGLWVLETACLQGVRWLTEGKPFGRIAVNVAGQQLQRSSFVEDVKR 736

Query: 1129 ILEESGLPPACLELELTESILMREVNEALQILASLKNLGLSIAVDDFGTGYSSLNYLKQF 1188
            IL ++GLP  CLELE+TES++M   + A++ L  L +LG+ ++VDDFGTGYSSLNYLK+ 
Sbjct: 737  ILTQTGLPATCLELEVTESVMMHNPDVAIRDLKLLGDLGIELSVDDFGTGYSSLNYLKKL 796

Query: 1189 PIDVLKIDRTFVDGLPEGEQDAQIARAIIAMAHSLNLAVIAEGVETHEQLEFLREHGCDE 1248
            PI  LKID++FV  +P    +  IA+A+IA+ H+L L ++AEGVET  Q EFL ++ CD+
Sbjct: 797  PIHKLKIDQSFVRDIPFDTNNTAIAKAVIALGHALKLEIVAEGVETQAQAEFLTQNLCDQ 856

Query: 1249 VQGYLFGRPMPAHQFEA 1265
             QGYLF RP+     EA
Sbjct: 857  AQGYLFSRPLLPADVEA 873