Pairwise Alignments

Query, 311 a.a., Homocysteine S-methyltransferase family protein from Pseudomonas putida KT2440

Subject, 1226 a.a., methionine synthase from Vibrio cholerae E7946 ATCC 55056

 Score = 54.3 bits (129), Expect = 1e-11
 Identities = 77/340 (22%), Positives = 134/340 (39%), Gaps = 63/340 (18%)

Query: 9   QRSYMAERTMVILDGGMGRELQR--------SGAPFRQPEWSA-------LALSEAPEAV 53
           Q     ++ ++++DGGMG  +Q          GA F   +W         L +   P+ +
Sbjct: 8   QLEQQLKQRILLIDGGMGTMIQSYKLQEEDYRGARF--VDWHCDLKGNNDLLVLTQPQII 65

Query: 54  VGVHAAFIDAGAQVITSNSYAVVPFHIGEERFAAEGRQLAHIAGQLARHAAD-----SGA 108
             +H+A+++AGA ++ +N++      + +    +   ++   A +LAR  AD       +
Sbjct: 66  KEIHSAYLEAGADILETNTFNSTTIAMADYDMQSLSAEINFAAAKLAREVADEWTAKDPS 125

Query: 109 HPVRVAGSLPPL--FGSYRPDLFQP-----------ERVAEVLTPLLQGLAPHVDLWLAE 155
            P  VAG L P     S  PD+  P           E  +E    L++G +   DL L E
Sbjct: 126 RPRYVAGVLGPTNRTCSISPDVNDPGFRNVTFDGLVEAYSESTRALIKGGS---DLILIE 182

Query: 156 TQSSVAEVRAIHSHLPADGRPFWVSF--TLQDEEVDEVPRLRSGEPVAEAIEAAVGLGVA 213
           T       +A    + +      +S    +     D   R  SG+       A   +   
Sbjct: 183 TIFDTLNAKACAFAVDSVFEELGISLPVMISGTITDASGRTLSGQTTEAFYNALRHVRPI 242

Query: 214 AVLFNCSQPEVIGAAIDVARSVIERHN--AEIAIGAYANAFPPQ---PKEATANDGLDEL 268
           +   NC+         D  R  +E  +  +E  + A+ NA  P      + +A +  + +
Sbjct: 243 SFGLNCA------LGPDELRQYVEELSRISECYVSAHPNAGLPNAFGEYDLSAEEMAEHI 296

Query: 269 REDLDPPGYLAWAKDWRARGASMVGGCCGIGPEHIAELKR 308
            E         WA   +A   ++VGGCCG  PEHIA + +
Sbjct: 297 AE---------WA---QAGFLNLVGGCCGTTPEHIAAIAK 324