Pairwise Alignments

Query, 275 a.a., putative Amino acid ABC transporter, periplasmic amino acid-binding protein from Pseudomonas putida KT2440

Subject, 260 a.a., L-lysine ABC transporter, substrate-binding component (from data) from Sinorhizobium meliloti 1021

 Score = 80.5 bits (197), Expect = 3e-20
 Identities = 63/239 (26%), Positives = 114/239 (47%), Gaps = 27/239 (11%)

Query: 44  SYPPFSFLNDHNQLDGYDVDVAKAVADKLGVKLRLETPSWDVIAAGRWSGRYDICICSMT 103
           +YPPF+ L     L G+D+D+AKA+ +++  +    T  WD I     + ++D  + SM+
Sbjct: 37  AYPPFNNLESDGTLTGFDIDIAKALCEEMKAECTFVTQDWDGIIPALIAKKFDAIVASMS 96

Query: 104 PSKARAEVFDFPVEYYASPAVIVVNASDERIHD--AKDLEGRKVGSISASSYESYLNKNL 161
            ++ R +  DF  +YY +P  IVV   D  I +  A  L G+ +G+  ++++ +Y   ++
Sbjct: 97  ITEERKQQVDFTNKYYNTPPAIVV-PKDSPITEATAAALSGKALGAQGSTTHSNYAEAHM 155

Query: 162 VIEGKEDQKIDYPFDFVQAAPYDTENVAFQDLGLGTGVRLDAIITNLVTAQPRLQQDKR- 220
               KE +   YP          T +    DL  G   R+DA I ++V     L+ +   
Sbjct: 156 ----KESEVKLYP----------TADEYKLDLANG---RIDAAIDDVVVLSEWLKTEDGA 198

Query: 221 -FKLAGA-----PLYEEPNAVAIEKGDPEWDAKVREVFAELKADGTLAKLSQKWIGADI 273
             KL G       +  E   +AI KGD     K+ +    ++A+G   ++++K+   D+
Sbjct: 199 CCKLLGTLPIDPVINGEGAGIAIRKGDDALREKLNKAIEAIRANGKYKQINEKYFPFDV 257