Pairwise Alignments

Query, 275 a.a., putative Amino acid ABC transporter, periplasmic amino acid-binding protein from Pseudomonas putida KT2440

Subject, 258 a.a., putative amino-acid ABC transporter, periplasmic solute-binding protein from Phaeobacter inhibens DSM 17395

 Score = 78.6 bits (192), Expect = 1e-19
 Identities = 78/264 (29%), Positives = 120/264 (45%), Gaps = 33/264 (12%)

Query: 16  LATATQAFAGATLERVESRKEMVNVLMESYPPFSFLNDHNQLDGYDVDVAKAVADKLGVK 75
           L  A  AFA  TL RV         +   Y PF+F+   + L G++VDV  AVA++ G++
Sbjct: 15  LTAAPSAFASDTL-RVG--------MSGGYFPFTFVRQ-DVLQGFEVDVMNAVAEETGLE 64

Query: 76  LRLETPSWDVIAAGRWSGRYDICICSMTPSKARAEVFDFPVEYYASPA-VIVVNASDERI 134
           +   T S+  +     S R D     +T +  R+  F F   Y    A V+V   +++ I
Sbjct: 65  VEFVTMSFSGLIGALESDRIDTIANQITITPERSAKFAFTQAYVIDGAQVVVKRGNEDSI 124

Query: 135 HDAKDLEGRKVGSISASSYESYLNKNLVIEGKEDQKIDYP-FDFVQAAPYDTENVAFQDL 193
               DL G+ V     S++E  L              + P  D ++   Y+  N+A QD 
Sbjct: 125 AGPADLAGKTVAVNLGSNFEQLLR-------------ELPQADKIEIKTYEA-NIA-QDT 169

Query: 194 GLGTGVRLDAIITNLVTAQPRLQQDK-RFKLAGAPLYEEPNAVAIEKGDPEWDA--KVRE 250
            LG   R+DA + + V++   +Q+      LAGAP  E  NA+   +G        +V  
Sbjct: 170 ALG---RVDAFVMDRVSSAQLIQESPLPLALAGAPFSEIRNALPFRQGADSLALRDRVDT 226

Query: 251 VFAELKADGTLAKLSQKWIGADIS 274
               L+  G LA++SQKW G DI+
Sbjct: 227 ALTTLREGGKLAEISQKWFGTDIT 250