Pairwise Alignments

Query, 275 a.a., putative Amino acid ABC transporter, periplasmic amino acid-binding protein from Pseudomonas putida KT2440

Subject, 264 a.a., ABC transporter substrate-binding protein from Methanococcus maripaludis JJ

 Score = 83.2 bits (204), Expect = 5e-21
 Identities = 65/270 (24%), Positives = 116/270 (42%), Gaps = 22/270 (8%)

Query: 8   LLGAGLVLLATATQAFAGATLERVESRKEMVNVLM----ESYPPFSFLNDHN-QLDGYDV 62
           L+GA L      + + A  T +      E   VL      ++PPF   N+   +++G+DV
Sbjct: 12  LIGAVLAFSGCVSNSEAQTTEDNSWKNVEESGVLKVGLCAAWPPFESRNEKTGEIEGFDV 71

Query: 63  DVAKAVADKLGVKLRLETPSWDVIAAGRWSGRYDICICSMTPSKARAEVFDFPVEYYASP 122
           D+A A+ ++LG+++ +    W  +  G   G YD  I  M+  +A  E  +    YY   
Sbjct: 72  DLANALGEELGIEVEIVDAEWQALLGGLSKGDYDTLITCMSKKEASVENVEMSDVYYELN 131

Query: 123 AVIVVNASDERIHDAKDLEGRKVGSISASSYESYLNKNLVIEGKEDQKIDYPFDFVQAAP 182
            VIVV   +  I++  DL G+ VG    S  E  ++  L I  KE ++ +Y       A 
Sbjct: 132 DVIVVRNDNNEINNVSDLSGKIVGVQLGSGSEQAVDALLGI--KEIKRYNYN----PEAM 185

Query: 183 YDTENVAFQDLGLGTGVRLDAIITNLVTAQPRLQQDKRFKLAGAPLYEEPNAVAIEKGDP 242
            D +N            R DA++         + +    K+   P+      +  ++G  
Sbjct: 186 IDLQN-----------NRSDAVVVGYTYVLSEISKYPDLKVLDTPMSSAEIVMVQKEGAK 234

Query: 243 EWDAKVREVFAELKADGTLAKLSQKWIGAD 272
           E   K+ E  +++K +G   ++  KW+  +
Sbjct: 235 ELTVKLNEALSKIKENGKYDEIQDKWLSLE 264