Pairwise Alignments

Query, 273 a.a., putative Amino acid ABC transporter, permease protein from Pseudomonas putida KT2440

Subject, 223 a.a., amino acid ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

 Score =  157 bits (398), Expect = 1e-43
 Identities = 89/202 (44%), Positives = 125/202 (61%), Gaps = 3/202 (1%)

Query: 75  TLFLCLCSMVVSVLLGFAAALARLSNSAVLVGVASFYTSFFRGTPLLIQILLIYLGLPQV 134
           TL +    +V +++L    A  R+    VL  ++  Y SFFRGTPLL+Q+ L+Y GLPQV
Sbjct: 22  TLEMASWGLVFALILALFLANIRVFKVPVLDPLSQLYISFFRGTPLLVQLFLLYYGLPQV 81

Query: 135 -GLVPG--AISAGIIALSLNYGAYLSEIFRAGILGVARGQREAALALGMRTPQIFCHIIL 191
             L+ G  A SA +I L+L++ AY++E  RA I+G+ R Q EA+L++GM T Q    IIL
Sbjct: 82  FPLLVGLDAFSAAVIGLTLHFAAYMAESIRAAIIGIDRSQMEASLSVGMTTSQAMRRIIL 141

Query: 192 PQAMRVIIPPTANQFISMLKDSSLISVMGVWEVMFLAQSYGRSSYRYLEMLTTAAVIYWV 251
           PQA RV +P   N FI M+K +SL   +GV E+M  AQ    SS+R+ E     A+IYWV
Sbjct: 142 PQATRVALPSLMNYFIDMIKSTSLAFTLGVAEIMAKAQMEASSSFRFFEAFLAVALIYWV 201

Query: 252 LSILLELLQARLERHFGKAYQR 273
           + ++L  LQ+  E+   KAY R
Sbjct: 202 VVLVLTRLQSWAEQKLNKAYAR 223