Pairwise Alignments

Query, 466 a.a., conserved protein of unknown function from Pseudomonas putida KT2440

Subject, 415 a.a., LysM domain. from Pseudomonas stutzeri RCH2

 Score =  117 bits (294), Expect = 6e-31
 Identities = 95/323 (29%), Positives = 143/323 (44%), Gaps = 32/323 (9%)

Query: 164 SYLQRLNPTFEQGFKAGEIFVIGDPDNGYACTQEEGQLMAAAERA--------------- 208
           S  QR N    +    GEI +I +     A  Q    L A A  A               
Sbjct: 104 SLFQRNNEHLNETVLPGEIVIISNMPRTDADRQRLEALRAQARLASEGIQQLTPAEAMTV 163

Query: 209 RRSLAVLDFAESDFMMEYQAEIAGLLSDASLSMGVGKDMMDHGLRQLRSTLGNIERLHQQ 268
           +R L VLD+   + +  +Q+   G+LS A+             L  +RSTL  I   +  
Sbjct: 164 KRHLEVLDYVSLETVASHQSTALGVLSAAA----------GRQLGNVRSTLEKINVAYVD 213

Query: 269 EFLRHGHLN--SPSFFAERRLLLEQLDGQLKATFLNKHLNLGAYERLKKSLNISTKSLVH 326
           E  R G+ N  SP F+A+R+ L  QL+  L    L+  +N+  Y+ +K +L +STKS++H
Sbjct: 214 ELSRTGNPNRFSPEFYAKRQQLFGQLNHSLGRLTLST-INIRNYDSIKTTLGLSTKSILH 272

Query: 327 HWSKAGGPGQIPGYATYLDKVAKLSKYLRYGGHVGIGLGGTSSYLKVQEACRAGETEGCK 386
           + S     G++P     ++ V+  +K     G++GI + G      +QEAC  G  + C 
Sbjct: 273 NASAITERGEVPQLGQRINTVSNWAKGASRLGYLGIAIDGGVRLNAIQEACTVGNDQVCT 332

Query: 387 KIRLSEAGAFAGGLAGGIVGGKIAGITALAVC-GVFSAGTAGFGAPVCGIALVGG---GA 442
           +    +   F G   GG VGG      A AV  G+  A     GAPV  +  + G   GA
Sbjct: 333 QTSFKQVTGFFGSAGGGAVGGFAGAKVATAVVGGIALAFGVTIGAPVLAVIAIAGAAAGA 392

Query: 443 FAGSIAGAEGGEQMGELIYESHY 465
           + G   G   GE++G +IY   Y
Sbjct: 393 YYGGSEGGSFGEEVGTIIYRGIY 415