Pairwise Alignments

Query, 402 a.a., Type 4 fimbrial assembly protein PilC from Pseudomonas putida KT2440

Subject, 406 a.a., type II secretion system protein GspF from Vibrio cholerae E7946 ATCC 55056

 Score =  196 bits (498), Expect = 1e-54
 Identities = 123/402 (30%), Positives = 206/402 (51%), Gaps = 8/402 (1%)

Query: 8   YHWHGTDANGAPVSGQTPGRSPAYVRAGLIRQGI-------TVASLRPASGLAFSLPKRR 60
           + +   DA G    G   G +   VR  L  Q +       T      +    F+  +  
Sbjct: 4   FEYKALDAKGRHKKGVIEGDNARQVRQRLKEQSLVPMEVVETQVKAARSRSQGFAFKRGI 63

Query: 61  EKADPAGFSRQLATLLKAGVPLLQAFEVMGRSGCDAAQAALLERLKQDVASGLGLADALQ 120
              D A  +RQLATL+++G+PL +    +           +L  ++  V  G  L+D+L 
Sbjct: 64  STPDLALITRQLATLVQSGMPLEECLRAVAEQSEKPRIRTMLVAVRAKVTEGYTLSDSLG 123

Query: 121 RHPAWFDALYCNLVRVGEQSGTLDRQLEQLAGMLEQRRVLHKKVRKAMIYPLLLLLTGLG 180
            +P  FD L+ ++V  GE+SG LD  LE+LA   E R+ +  K+++AMIYP++L++  +G
Sbjct: 124 DYPHVFDELFRSMVAAGEKSGHLDSVLERLADYAENRQKMRSKLQQAMIYPVVLVVFAVG 183

Query: 181 VSAILLLEVIPKFESMFSGMGAALPAFTQWVINLSTGLSRFAPLLLVMGVVMGVAVRQLY 240
           + A LL  V+PK    F  MG ALPA TQ++++ S  L  +   LLV G++M + + +  
Sbjct: 184 IVAFLLAAVVPKIVGQFVQMGQALPASTQFLLDASDFLQHWGISLLV-GLLMLIYLVRWL 242

Query: 241 RQHAPARLWISRRVLGLPVFGKLLGQAALARFARSLATSYGAGVPLLDALGTVARVTGGD 300
                 RL   RRV+ LPV GK+      ARFAR+L+    + +P+LD +     V    
Sbjct: 243 LTKPDIRLRWDRRVISLPVIGKIARGLNTARFARTLSICTSSAIPILDGMRVAVDVMTNQ 302

Query: 301 LHEQAVLRLRQGMANGQGLNQAMAGEPLFPPLLVQLTAIGESSGTLDQMLEKAASHYEEQ 360
             +Q VL   + +  G  L +A+    LFPP+++ + A GE SG L+ ML +AA + +  
Sbjct: 303 FVKQQVLAAAENVREGSSLRKALEQTKLFPPMMLHMIASGEQSGELEGMLTRAADNQDNS 362

Query: 361 VSQALDQLTSLLEPAIVLILGLLVGGLVVAMYLPIFQLGSLI 402
               ++    +  PA++ ++  +V  +V+A  +PI ++ +L+
Sbjct: 363 FESTVNIALGIFTPALIALMAGMVLFIVMATLMPILEMNNLM 404