Pairwise Alignments

Query, 235 a.a., conserved membrane protein of unknown function from Pseudomonas putida KT2440

Subject, 220 a.a., hypothetical protein from Vibrio cholerae E7946 ATCC 55056

 Score =  100 bits (249), Expect = 2e-26
 Identities = 58/187 (31%), Positives = 93/187 (49%)

Query: 40  WVELFTDRRRQHLLFGTVFCLFALWLVRRDFDTGVSYHFIGMTAVTLLLDWPLAVLGGFM 99
           W +   D+  QHL +  +  LF LW  +     G+S HF+ +T +T++  W  A +    
Sbjct: 28  WPKFRDDKSFQHLTYFVMLGLFLLWSAQASVKEGLSIHFLALTTLTMMYGWRSAFILTLP 87

Query: 100 AQLGLLALGRQDLAALGVNGLMLIGLPVLITEVCAIVVERAQPRNLFVYIFCSGFFPAAL 159
               L   G+   AAL    L+   LP+LI+     +     PRN+FV+IF +GFF A +
Sbjct: 88  VSATLALFGKISFAALPEYLLLSSLLPILISYSIFALSYHYLPRNIFVFIFVAGFFNAGV 147

Query: 160 TVLVCVPAALGVLWLDGRFALPEWLSDFVGYLWLMMFPEAFINGMVISALVVFCPEWLET 219
           T  + +      +W  G +       +++ ++ L+ FPE  +NGM ++ L VF PEWL  
Sbjct: 148 TGSLHLLLNSLYIWQLGAYDWITITDNYLIFVPLLAFPEGLLNGMALAILAVFRPEWLRV 207

Query: 220 FNRTRYL 226
           F+   YL
Sbjct: 208 FSDRDYL 214



 Score = 23.9 bits (50), Expect = 0.003
 Identities = 11/25 (44%), Positives = 15/25 (60%)

Query: 23  GWLGYVPLLIWAVSRVRWVELFTDR 47
           G L  + L I AV R  W+ +F+DR
Sbjct: 187 GLLNGMALAILAVFRPEWLRVFSDR 211