Pairwise Alignments

Query, 854 a.a., Chaperone protein ClpB from Pseudomonas putida KT2440

Subject, 895 a.a., ATPase from Synechococcus elongatus PCC 7942

 Score =  882 bits (2278), Expect = 0.0
 Identities = 480/866 (55%), Positives = 640/866 (73%), Gaps = 28/866 (3%)

Query: 4   DRLTSKLQLAISDAQSLAVGMDHPAIEPVHLLQALLEQQGGSIKPLLMQVGFDINGLRQG 63
           +R T +   AI ++Q++A  +    +E  H+L ALL+Q+ G    +L + G  +  LRQ 
Sbjct: 7   NRFTDQAWDAIVESQTVARQLRQQQLEVEHVLLALLDQESGVAAEILAKAGVAVANLRQP 66

Query: 64  LVKELDQLPKIQNPTGDVNMSQDLARLLNQADRLAQQKGDQFISSELVLLAAMDENSKLG 123
           L     + P+  + T  + + + L RLL+ A+R  +   D+FI  E +L+  + E+ ++G
Sbjct: 67  LEDFARRQPRNASGT-QLYLGRGLDRLLDLAERARELWQDEFIGVEHLLMGFV-EDDRIG 124

Query: 124 KLLLSQGVS--KKALENAINNLRGGAAVNDANAEESRQA---LDKYTVDLTKRAEEGKLD 178
           + L +QG+    K LE  I  LR  AA ++A AEES  +   L KY  DLT  AE+ KLD
Sbjct: 125 RRL-AQGLKLDAKTLETTIQALRSPAA-DEAEAEESEPSYPFLSKYGRDLTALAEQEKLD 182

Query: 179 PVIGRDDEIRRTVQVLQRRTKNNPVLIGEPGVGKTAIAEGLAQRIINGEVPDGLKGKRLL 238
           PVIGRD EIRR +QVL RR+KNNPVLIGEPGVGKTAIAEGLAQRI+ GEVPD LK +RL+
Sbjct: 183 PVIGRDLEIRRVIQVLSRRSKNNPVLIGEPGVGKTAIAEGLAQRIVAGEVPDSLKQRRLI 242

Query: 239 ALDMGALIAGAKYRGEFEERLKSLLNELSKQEGQIILFIDELHTMVGAGKGE--GAMDAG 296
           +LDMG+LIAGAKYRGEFEERL+++L+E++  +GQ++LFIDELHT+VGAG G+   AMDAG
Sbjct: 243 SLDMGSLIAGAKYRGEFEERLRAVLHEVTHSDGQMVLFIDELHTVVGAGAGQQGSAMDAG 302

Query: 297 NMLKPALARGELHCVGATTLNEYRQFIEKDAALERRFQKVLVEEPSEEDTIAILRGLKER 356
           N+LKP LARGEL C+GATT +EYR+ IEKD ALERRFQ+V V +PS EDTIAILRGLKER
Sbjct: 303 NLLKPMLARGELRCIGATTTDEYRRTIEKDPALERRFQQVYVSQPSVEDTIAILRGLKER 362

Query: 357 YEVHHKVAITDGAIIAAAKLSHRYITDRQLPDKAIDLIDEAASRIRMEIDSKPEVLDRLD 416
           YE HH V ITDGA++AAAKLSHRYI+DR LPDKAIDLIDEA+++++MEI SKP  L+ L+
Sbjct: 363 YEGHHGVKITDGALMAAAKLSHRYISDRFLPDKAIDLIDEASAQLKMEITSKPSELEDLE 422

Query: 417 RRLIQLKVESQALKKEEDEAA--KKRLEKLTEEIERLEREYSDLEEIWASEKAEVQGSAQ 474
           RRL+QL++E  +L  E  +A+    RL+++  E++ L+ + + L + W  EK  ++   +
Sbjct: 423 RRLLQLEMEQLSLSGENGQASVHSDRLQQIQTELQTLQEQQARLNQQWQQEKQLLEELGR 482

Query: 475 IQQKIEQSRQELEAARRKGDLNRMAELQYGVIPDLERSLQMVDQ-------HGKTDNQLL 527
           +Q++ E  RQ++  A R+ DLN+ AEL++G +  L++  Q +++       +G+T   LL
Sbjct: 483 LQEEEETLRQQVNQAEREHDLNKGAELKFGQLEALQQQRQAIEEQIQALHANGQT---LL 539

Query: 528 RNKVTEEEIAEVVSKWTGIPVAKMLEGEREKLLKMEELLHQRVIGQSEAVTAVANAVRRS 587
           R +V E +IAE+V++WT IPV ++LE ER+KLL++E  LHQRVIGQ EAV AVA A+RR+
Sbjct: 540 REQVEEADIAEIVARWTNIPVQRLLESERQKLLQLESFLHQRVIGQDEAVVAVAAAIRRA 599

Query: 588 RAGLSDPNRPSGSFLFLGPTGVGKTELCKALAEFLFDTEEAMVRIDMSEFMEKHSVARLI 647
           RAG+ DP+RP GSFLFLGPTGVGKTEL +ALA  LFD E+A++R DMSE+MEK+S++RLI
Sbjct: 600 RAGMKDPSRPIGSFLFLGPTGVGKTELARALANCLFDAEDALIRFDMSEYMEKNSISRLI 659

Query: 648 GAPPGYVGYEEGGYLTEAVRRKPYSVVLLDEVEKAHPDVFNVLLQVLEDGRLTDSHGRTV 707
           GAPPGY+GYEEGG L+EA+RR PY+VVL DEVEKAHPDVFN+LLQVL+DGR+TDS GRT+
Sbjct: 660 GAPPGYIGYEEGGQLSEAIRRHPYAVVLFDEVEKAHPDVFNLLLQVLDDGRITDSQGRTI 719

Query: 708 DFRNTVIVMTSNLGSAQIQELVGDREAQRAA----VMDAVGAHFRPEFINRIDEVVVFEP 763
           DF N VIVMTSN+GS  I E+ G+ EA   A    V+ A+  HFRPEF+NRID+ ++F+P
Sbjct: 720 DFCNAVIVMTSNIGSQFILEM-GEEEASLDAVELKVLGALRQHFRPEFLNRIDDTILFQP 778

Query: 764 LGREQIAGITEIQLGRLRSRLLERELSLSLSPEALDKLIAVGYDPVYGARPLKRAIQRWI 823
           L R Q+  I +IQL RL+  L E+ ++L+++P A   L   GYDPVYGARPLKRAIQR I
Sbjct: 779 LSRGQLQQIVDIQLQRLKRLLAEQAIALNVTPAAAANLADRGYDPVYGARPLKRAIQRLI 838

Query: 824 ENPLAQLILAGKFLPGTAITAKVEGD 849
           ENP+A LIL  +F  G A+   V+ +
Sbjct: 839 ENPVASLILEQQFDAGDALIVDVDAE 864