Pairwise Alignments

Query, 854 a.a., Chaperone protein ClpB from Pseudomonas putida KT2440

Subject, 824 a.a., ATPase from Synechococcus elongatus PCC 7942

 Score =  668 bits (1723), Expect = 0.0
 Identities = 384/865 (44%), Positives = 539/865 (62%), Gaps = 80/865 (9%)

Query: 4   DRLTSKLQLAISDAQSLAVGMDHPAIEPVHLLQALLEQQGGSIKPLLMQVGFDINGLRQG 63
           +R T K    I  AQ  A  + H  +    +L  L+ +  G    +L  +G ++   R  
Sbjct: 3   ERFTEKAIKVIMLAQEEARRLGHNFVGTEQILLGLIGEGTGVAAKVLKSMGVNLKDARIE 62

Query: 64  LVKELDQLPKIQNPTGDVNMSQDLARLLNQADRLAQQKGDQFISSELVLLAAMDENSKLG 123
           + K + +         ++  +    R+L  +   A+Q G  +I +E +LL  + E   + 
Sbjct: 63  VEKIIGRGSGFV--AVEIPFTPRAKRVLELSLEEARQLGHNYIGTEHLLLGLIREGEGVA 120

Query: 124 -KLLLSQGVSKKALENAINNLRGGAAVNDANAEESRQ---ALDKYTVDLTKRAEEGKLDP 179
            ++L + GV    +   +  + G  A       + R     LD++  +LT++A +GKLDP
Sbjct: 121 ARVLENLGVDLSKVRTQVIRMLGETAEVSTGGGQGRTKTPTLDEFGSNLTQQAADGKLDP 180

Query: 180 VIGRDDEIRRTVQVLQRRTKNNPVLIGEPGVGKTAIAEGLAQRIINGEVPDGLKGKRLLA 239
           V+GR  EI R +Q+L RRTKNNPVLIGEPGVGKTAIAEGLAQRI  G++PD L+ KR++ 
Sbjct: 181 VVGRQKEIERVIQILGRRTKNNPVLIGEPGVGKTAIAEGLAQRIATGDIPDILEDKRVVT 240

Query: 240 LDMGALIAGAKYRGEFEERLKSLLNELSKQEGQIILFIDELHTMVGAGKGEGAMDAGNML 299
           LD+G L+AG KYRGEFEERLK +++E+ +  G +IL IDE+HT++GAG  EGA+DA N+L
Sbjct: 241 LDIGLLVAGTKYRGEFEERLKKIMDEI-RSAGNVILVIDEVHTLIGAGAAEGAIDAANIL 299

Query: 300 KPALARGELHCVGATTLNEYRQFIEKDAALERRFQKVLVEEPSEEDTIAILRGLKERYEV 359
           KPALARGEL C+GATTL+EYR+ IE+DAALERRFQ V+V EPS +DTI ILRGL+ERYE 
Sbjct: 300 KPALARGELQCIGATTLDEYRKHIERDAALERRFQPVMVGEPSVDDTIEILRGLRERYEQ 359

Query: 360 HHKVAITDGAIIAAAKLSHRYITDRQLPDKAIDLIDEAASRIRMEIDSKPEVLDRLDRRL 419
           HHK+ I D A+ AAAKL+     DR + D+ +              D   +++D    R+
Sbjct: 360 HHKLKIADEALEAAAKLA-----DRYISDRFLP-------------DKAIDLIDEAGSRV 401

Query: 420 IQLKVESQALKKEEDEAAKKRLEKLTEEIERLEREYSDLEEIWASEKAEVQGSAQIQQKI 479
             +  +     KE D+  ++ L+   + +        D ++       E++   QI+  I
Sbjct: 402 RLMNSQLPPAAKELDKELRQVLKDKDDAVRS-----QDFDKAGELRDREMEIKTQIRS-I 455

Query: 480 EQSRQELEAARRKGDLNRMAELQYGVIPDLERSLQMVDQHGKTDNQLLRNKVTEEEIAEV 539
            QS++                                D    TD+  +   VTEE+IA +
Sbjct: 456 AQSKK-------------------------------ADGTSSTDDSPI---VTEEDIAHI 481

Query: 540 VSKWTGIPVAKMLEGEREKLLKMEELLHQRVIGQSEAVTAVANAVRRSRAGLSDPNRPSG 599
           V+ WTG+PV K+ E E  KLL MEE LH R+IGQ EAV AV+ A+RR+R GL +PNRP  
Sbjct: 482 VASWTGVPVNKLTESESTKLLNMEETLHSRLIGQDEAVKAVSRAIRRARVGLKNPNRPIA 541

Query: 600 SFLFLGPTGVGKTELCKALAEFLFDTEEAMVRIDMSEFMEKHSVARLIGAPPGYVGYEEG 659
           SF+F GPTGVGKTEL KALA + F +EEAM+R+DMSE+ME+H+V++LIG+PPGYVGY EG
Sbjct: 542 SFIFSGPTGVGKTELTKALAAYFFGSEEAMIRLDMSEYMERHTVSKLIGSPPGYVGYNEG 601

Query: 660 GYLTEAVRRKPYSVVLLDEVEKAHPDVFNVLLQVLEDGRLTDSHGRTVDFRNTVIVMTSN 719
           G LTEAVRR+PY+VVLLDE+EKAHPDVFN+LLQ+LEDGRLTD+ GRTVDF+NT+I++TSN
Sbjct: 602 GQLTEAVRRRPYTVVLLDEIEKAHPDVFNLLLQLLEDGRLTDAKGRTVDFKNTLIILTSN 661

Query: 720 LGSAQIQ--------ELVGDREAQ------RAAVMDAVGAHFRPEFINRIDEVVVFEPLG 765
           +GS  I+        E  G  EA+      R+ V + +  +FRPEF+NR+DE++VF  L 
Sbjct: 662 IGSKVIEKGGGGLGFEFSGVDEAENQYNRIRSLVNEELKQYFRPEFLNRLDEIIVFRQLN 721

Query: 766 REQIAGITEIQLGRLRSRLLERELSLSLSPEALDKLIAVGYDPVYGARPLKRAIQRWIEN 825
           +E++  I +I L  +  R+LE+ +SLS++ +  D+L+  GY+P YGARPL+RAI R +E+
Sbjct: 722 KEEVKEIADIMLREVFGRMLEKGISLSVTEKFKDRLVEEGYNPSYGARPLRRAIMRLLED 781

Query: 826 PLAQLILAGKFLPGTAITAKVEGDE 850
            LA+  L+GK   G      + G+E
Sbjct: 782 SLAEEFLSGKLREGDTAVVDI-GEE 805