Pairwise Alignments

Query, 854 a.a., Chaperone protein ClpB from Pseudomonas putida KT2440

Subject, 868 a.a., ATP-dependent protease from Sinorhizobium meliloti 1021

 Score =  976 bits (2522), Expect = 0.0
 Identities = 501/857 (58%), Positives = 646/857 (75%), Gaps = 4/857 (0%)

Query: 1   MRIDRLTSKLQLAISDAQSLAVGMDHPAIEPVHLLQALLEQQGGSIKPLLMQVGFDINGL 60
           M I++ + +++  +  AQ+ A+   H    P H+L+ LL+   G    L+ + G +    
Sbjct: 1   MDIEKYSERVRGFLQSAQTYALAEGHQQFTPEHVLKVLLDDDQGMAASLIERAGGNAREA 60

Query: 61  RQGLVKELDQLPKIQNPTGDVNMSQDLARLLNQADRLAQQKGDQFISSELVLLA-AMDEN 119
           + G    L +LPK+    G V +SQ LA++   A+  A++ GD F++ E +LLA A++ +
Sbjct: 61  KVGTAAALAKLPKVTGGNGSVYLSQPLAKVFTAAEDAAKKAGDSFVTVERLLLALAIESS 120

Query: 120 SKLGKLLLSQGVSKKALENAINNLRGGAAVNDANAEESRQALDKYTVDLTKRAEEGKLDP 179
           +    +L   GV+   L   IN +R G   + ANAE+   +L KY  DLT  A EGKLDP
Sbjct: 121 AATASILSKAGVTPTKLNQVINEIRKGRTADSANAEQGFDSLKKYARDLTAEAREGKLDP 180

Query: 180 VIGRDDEIRRTVQVLQRRTKNNPVLIGEPGVGKTAIAEGLAQRIINGEVPDGLKGKRLLA 239
           VIGRDDEIRRT+QVL RRTKNNPVLIGEPGVGKTAIAEGLA RI+NG+VP+ LK KRL+A
Sbjct: 181 VIGRDDEIRRTIQVLSRRTKNNPVLIGEPGVGKTAIAEGLALRIVNGDVPESLKDKRLMA 240

Query: 240 LDMGALIAGAKYRGEFEERLKSLLNELSKQEGQIILFIDELHTMVGAGKGEGAMDAGNML 299
           LDMGALIAGAK+RGEFEERLK++LNE+  + G+IILFIDE+HT+VGAGK +GAMDA N+L
Sbjct: 241 LDMGALIAGAKFRGEFEERLKAVLNEVRSEGGEIILFIDEMHTLVGAGKADGAMDASNLL 300

Query: 300 KPALARGELHCVGATTLNEYRQFIEKDAALERRFQKVLVEEPSEEDTIAILRGLKERYEV 359
           KPALARGELHCVGATTL+EYR+ +EKDAAL RRFQ V+VEEP+ EDTI+ILRGLKE+YE 
Sbjct: 301 KPALARGELHCVGATTLDEYRKHVEKDAALARRFQPVMVEEPTVEDTISILRGLKEKYEQ 360

Query: 360 HHKVAITDGAIIAAAKLSHRYITDRQLPDKAIDLIDEAASRIRMEIDSKPEVLDRLDRRL 419
           HHKV I+D A++AAA LS+RYITDR LPDKAIDL+DEAASR+RM++DSKPE LD LDRR+
Sbjct: 361 HHKVRISDSALVAAAALSNRYITDRFLPDKAIDLMDEAASRLRMQVDSKPEELDELDRRV 420

Query: 420 IQLKVESQALKKEEDEAAKKRLEKLTEEIERLEREYSDLEEIWASEKAEVQGSAQIQQKI 479
           IQLK+E +ALKKE D ++K RL KL  ++  LE E + L   W +EK ++  +A +++++
Sbjct: 421 IQLKIEREALKKETDVSSKDRLAKLELDLSSLEEEAAALTARWQAEKQKLGQAADLKKQL 480

Query: 480 EQSRQELEAARRKGDLNRMAELQYGVIPDLERSL-QMVDQHGKTDNQLLRNKVTEEEIAE 538
           +++R EL+ A+RKG+  R  EL YGVIP+LE+ L +   Q G + N +++  VT + IA 
Sbjct: 481 DEARNELQIAQRKGEFQRAGELAYGVIPNLEKELAEAESQDGASANPMVQEVVTPDNIAH 540

Query: 539 VVSKWTGIPVAKMLEGEREKLLKMEELLHQRVIGQSEAVTAVANAVRRSRAGLSDPNRPS 598
           +VS+WTGIPV KMLEGER+KLL+ME+ L + V+GQ +AV AV+ AVRRSRAGL DPNRP 
Sbjct: 541 IVSRWTGIPVDKMLEGERDKLLRMEDELAKWVVGQGDAVQAVSRAVRRSRAGLQDPNRPI 600

Query: 599 GSFLFLGPTGVGKTELCKALAEFLFDTEEAMVRIDMSEFMEKHSVARLIGAPPGYVGYEE 658
           GSF+FLGPTGVGKTEL KALA FLFD E A++RIDMSE+MEKHSVARLIGAPPGYVGYEE
Sbjct: 601 GSFIFLGPTGVGKTELTKALARFLFDDETALMRIDMSEYMEKHSVARLIGAPPGYVGYEE 660

Query: 659 GGYLTEAVRRKPYSVVLLDEVEKAHPDVFNVLLQVLEDGRLTDSHGRTVDFRNTVIVMTS 718
           GG LTE+VRR+PY VVL DE+EKAHPDVFNVLLQVL+DGRLTD  GRTVDF+NT+I+MTS
Sbjct: 661 GGALTESVRRRPYQVVLFDEIEKAHPDVFNVLLQVLDDGRLTDGQGRTVDFKNTMIIMTS 720

Query: 719 NLGSAQIQEL--VGDREAQRAAVMDAVGAHFRPEFINRIDEVVVFEPLGREQIAGITEIQ 776
           NLG+  +  L    D +A R  VM+ V A FRPEF+NR+DE+++F  L R ++  I +IQ
Sbjct: 721 NLGAEYLTALGENEDSDAVRDQVMEVVRAAFRPEFLNRVDEIILFHRLRRSEMGAIVDIQ 780

Query: 777 LGRLRSRLLERELSLSLSPEALDKLIAVGYDPVYGARPLKRAIQRWIENPLAQLILAGKF 836
           L RLR  L +R+++L L  +A   L   GYDP YGARPLKRAIQ+++++PLA+ +L G+F
Sbjct: 781 LERLRKLLSDRKITLELEDDARVFLADRGYDPAYGARPLKRAIQKYVQDPLAEKVLQGEF 840

Query: 837 LPGTAITAKVEGDEIVF 853
             G+ I      D + F
Sbjct: 841 PDGSVIKVVAGSDRLNF 857