Pairwise Alignments

Query, 400 a.a., Branched-chain amino acid ABC transporter, periplasmic amino acid-binding protein from Pseudomonas putida KT2440

Subject, 422 a.a., urea ABC transporter, urea binding protein from Pseudomonas stutzeri RCH2

 Score = 74.3 bits (181), Expect = 6e-18
 Identities = 92/370 (24%), Positives = 146/370 (39%), Gaps = 25/370 (6%)

Query: 1   MQRRTLLKAGLALGALGSLPLGAHRAFADQPLTFYGLKSMSGAFA-SYGKYADMGSRLA- 58
           M+RR LLK+ LA  AL    L      A + +    L S+SG  A S     DM      
Sbjct: 1   MKRRPLLKSTLAASALMLSGLFPFTLQAAETIKVGILHSLSGTMAISETSLKDMALMTID 60

Query: 59  -IAEHPQLLGHPLKYKVIDTEGNAGKAVRKVQEAIGQDGARFFQGCTLSSSALAVSKEIH 117
            I     +LG  L+  V+D   N      K ++ + QD      GC  S S  +V     
Sbjct: 61  EINAKGGVLGKQLEPVVVDPASNWPLFAEKGRQLLTQDKVAVTFGCWTSVSRKSVLPVYE 120

Query: 118 KAGGVFMTPVGADEITGKDCNASTF-RWSVPTYGAIRETLVPMSRQLPQAKRWYTITPQY 176
           +  G+   PV   +  G++ + + F   + P   AI      MS     A+R++ +   Y
Sbjct: 121 ELDGLLFYPV---QYEGEELSPNVFYTGAAPNQQAIPAVEYLMSEDGGSAERFFLLGTDY 177

Query: 177 VFGDALLDNARKVFAELGVEH--IGNSYHSLQEQEFSGYLTN----AIAAKPDVLVLLNF 230
           V+        R      GV    I   Y      ++   + N    +   K  V+  +N 
Sbjct: 178 VYPRTTNKILRAFLISKGVPESSIEEVYTPFGHSDYQTIVANIKKFSAGGKTAVVSTIN- 236

Query: 231 GSQASNALRQAVNFGIKDRMKVLMVWSAGLDQFQELGSDVLEGVYLGAQYWHQVDTPLNK 290
           G       ++  N G+      ++ +S G ++ + + +  L G      Y+  V+ P+N+
Sbjct: 237 GDSNVPFYKELANQGLDATDVPVVAFSVGEEELRGIDTKPLVGHLAAWNYFQSVENPVNE 296

Query: 291 LLVAATRKAYGINPNYP----------LAADYIGTKVMLEAIVKAGSLDGAAVSAALQGM 340
             V+   KAY    N P          + A Y+G  +  +A+ KAG+ D   V  AL G 
Sbjct: 297 AFVSKW-KAYAKAKNLPGADKAVTNDPMEATYVGIHMWAQAVEKAGTTDVGKVRDALAGQ 355

Query: 341 RFQGPTGEEL 350
            FQ P+G  L
Sbjct: 356 TFQAPSGYTL 365