Pairwise Alignments

Query, 400 a.a., Branched-chain amino acid ABC transporter, periplasmic amino acid-binding protein from Pseudomonas putida KT2440

Subject, 401 a.a., periplasmic binding ABC transporter protein from Sinorhizobium meliloti 1021

 Score =  102 bits (254), Expect = 2e-26
 Identities = 98/374 (26%), Positives = 157/374 (41%), Gaps = 19/374 (5%)

Query: 37  LKSMSGAFASYGKYADMGSRLAIAEH--PQLLGHPLKYKVIDTEGNAGKAVRKVQEAIGQ 94
           L   SG +A +G  +   + L   E    ++LG P++    D +     A    ++    
Sbjct: 33  LNDQSGVYADFGGKSSYEAALMAVEDFGGKVLGVPVEVVTADHQNKPDIASNIARQWYDT 92

Query: 95  DGARFFQGCTLSSSALAV---SKEIHKAGGVFMTPVGADEITGKDCNASTFRWSVPTYGA 151
           +        T SS ALAV   SKE  K     +T     E+TGK C+   F W+  T+  
Sbjct: 93  EQVDSIMELTTSSVALAVQAISKEKKKID--IVTGAATTELTGKQCSPYGFHWAYDTHSL 150

Query: 152 IRETLVPMSRQLPQAKRWYTITPQYVFGDALLDNARKVFAELGVEHIGNSYHSLQEQEFS 211
              T   + +Q      W+ +T  Y FG +L +N      E G   +G   H L   +FS
Sbjct: 151 AVGTGGALVKQ--GGDSWFFLTADYAFGYSLEENTGNYVKENGGTVVGAVRHPLATTDFS 208

Query: 212 GYLTNAIAAKPDVLVLLNFGSQASNALRQAVNFGIKDRMKVLMVWSAGLDQFQELGSDVL 271
            +L  A ++   V+ L N G   SNA++QA  FGI    + L      L +   LG D  
Sbjct: 209 SFLLQAQSSGAKVIGLANAGLDTSNAIKQAAEFGIVQGGQRLAALLFTLAEVHGLGLDAA 268

Query: 272 EGVYL-GAQYWH--QVDTPLNKLLVAATRKAYGINPNYPLAADYIGTKVMLEAIVKAGSL 328
           +G+ L    YW+  +      K  +  T K     PN   A  Y      L+AI KAG+ 
Sbjct: 269 QGLTLTEGFYWNRDEESAKFGKRFMERTGKM----PNMVHAGTYSAVLQYLKAIEKAGTD 324

Query: 329 DGAAVSAALQGMRFQGPTGEELIRPGDHQVLKDYYLLRGKPQGQMRDEDDLAEVISS--- 385
           +  AV+  L  +       +      + +++ D YLL  K   + ++  D  +V+++   
Sbjct: 325 ETEAVAKELHALPVDDVFAKNGTVAPNGRMIHDMYLLEVKKPDESKEPWDYFKVLATIPG 384

Query: 386 GRSFVEVDHTGCAL 399
             +F++   +GC L
Sbjct: 385 KEAFIDPAQSGCEL 398