Pairwise Alignments

Query, 286 a.a., Branched-chain amino acid ABC transporter, permease protein from Pseudomonas putida KT2440

Subject, 300 a.a., high-affinity branched-chain amino acid ABC transporter permease from Sinorhizobium meliloti 1021

 Score =  145 bits (365), Expect = 1e-39
 Identities = 82/296 (27%), Positives = 156/296 (52%), Gaps = 14/296 (4%)

Query: 2   LDLYLFQLLNGLGLGMIYFLIAVGLTIIFGLLNFVNFAHGAFFLLGAYLCYTAVAVTGNF 61
           ++ ++ QL+NGL LG IY +IA+G T+++G++  +NFAHG  F+LG +       +   F
Sbjct: 1   MEYFVQQLVNGLTLGSIYGMIAIGYTMVYGIIGMINFAHGDIFMLGGFAALIVFLLLTTF 60

Query: 62  ---------WLALLIAPLVVAAL-AWAVERLLIKRIYHLPHTFQILVTLGIALIIQEASV 111
                     L +++  ++ AAL  W +ER+  + +        ++  +G+++++     
Sbjct: 61  IAGVPVVLALLIMMVVGMLTAALWNWTIERVAYRPLRGSFRLAPLITAIGMSIVLSNFIQ 120

Query: 112 LIWGPVGKNIAVPPELRGVLILGDFIYPYYRLFLIGFAALIGIGLWLLLERTRFGALVRA 171
           +  GP  +N  +PP +  V  L        ++ ++   A++    W ++ RT  G   RA
Sbjct: 121 VTQGP--RNKPIPPLVSSVYDLFGISVSLKQIIIVVITAILLSVFWYIVNRTPLGRAQRA 178

Query: 172 GSESTETVSLLGTNIFRLFSLTFALGVGLAGVAGVLFAPLRGAQPFVGPEILGI-AFVVV 230
             +  +  +LLG ++ R  S+TF +G  LA VAG ++    G   F      G+ AF   
Sbjct: 179 TEQDRKMAALLGVDVDRTISVTFIMGAALAAVAGTMYLMYYGVVVFTDGFAPGVKAFTAA 238

Query: 231 VIGGMGSFGGALVGGLLVGVVQSMMTSLWP-QGASLMIYGAMAAVILVRPYGLFGR 285
           V+GG+GS  GA++GGLL+G+++S+ ++ +      +  +  +A V++ +P G+ GR
Sbjct: 239 VLGGIGSLPGAVLGGLLIGLIESLWSAYFTIDYKDVATFSILAIVLIFKPSGILGR 294