Pairwise Alignments

Query, 286 a.a., Branched-chain amino acid ABC transporter, permease protein from Pseudomonas putida KT2440

Subject, 336 a.a., branched-chain amino acid ABC transporter permease from Rhodopseudomonas palustris CGA009

 Score =  175 bits (444), Expect = 1e-48
 Identities = 108/285 (37%), Positives = 164/285 (57%), Gaps = 15/285 (5%)

Query: 13  LGLGMIYFLIAVGLTIIFGLLNFVNFAHGAFFLLGAYLCYTAV----AVTGNFWL----- 63
           L +GM+ F++A GLT++FGL++ +NF HGAF  +GAY+    +    A++G   L     
Sbjct: 48  LAMGMMIFIMASGLTLVFGLMDVLNFGHGAFIAVGAYVATLVLLPLAAMSGADSLLTNLA 107

Query: 64  ----ALLIAPLVVAALAWAVERLLIKRIYHLPHTFQILVTLGIALIIQEASVLIWGPVGK 119
               A+L A  V  AL   VER+LI  +Y   H  QIL+T G  ++ ++A   +WGP   
Sbjct: 108 VLVPAVLAAMAVSGALGVVVERVLILPVYG-QHLKQILMTTGGLIVAEQALYALWGPQII 166

Query: 120 NIAVPPELRGVLILGDFIYPYYRLFLIGFAALIGIGLWLLLERTRFGALVRAGSESTETV 179
            + +P  LRG  I+GD     YRL ++    ++ +G+ L L RT+ G L+RAG E+ E V
Sbjct: 167 PLPLPTSLRGSFIIGDIAIAKYRLLVMLVGLVVFVGIQLTLNRTKIGLLIRAGVENREMV 226

Query: 180 SLLGTNIFRLFSLTFALGVGLAGVAGVLFAPLR-GAQPFVGPEILGIAFVVVVIGGMGSF 238
             LG ++ RLF   F +G  LAG+ GV++A  R      +G E+  + F+VV+IGG+GS 
Sbjct: 227 EALGYHVKRLFLGVFMVGSALAGLGGVMWALYREQVHASMGNELTVLIFIVVIIGGLGSV 286

Query: 239 GGALVGGLLVGVVQSMMTSLWPQGASLMIYGAMAAVILVRPYGLF 283
           GG  +G LLV +V +    L P+ A +     M A+++ RP GL+
Sbjct: 287 GGCFIGALLVAMVANYGGFLVPKLALVSNILLMVAILMWRPRGLY 331