Pairwise Alignments

Query, 339 a.a., Branched-chain amino acid ABC transporter, permease protein from Pseudomonas putida KT2440

Subject, 314 a.a., inner-membrane translocator (NCBI) from Rhodospirillum rubrum S1H

 Score =  204 bits (520), Expect = 2e-57
 Identities = 120/303 (39%), Positives = 173/303 (57%), Gaps = 11/303 (3%)

Query: 18  LSLVVASLVALPLLLPSATLATEILIFAMAALACNLLLGYTGLLSFGQGIFFGVGAYGAA 77
           L+L+VA     P+ L       ++L FA+ A A NLLLGY GLLSFG   FFG  AY +A
Sbjct: 15  LALIVAPFFVYPVFL------MKVLCFALFACAFNLLLGYVGLLSFGHAAFFGFAAYVSA 68

Query: 78  LLMIHLQWGMFAALLGAAVFGAFLALLVGALAIRRTGIYFVMLTLAFSQMAYFLAYTLSG 137
             +   + G   A+    +    L L  G LAIRR GIYF M+TLA +QM YFL    + 
Sbjct: 69  HALKVWELGPLQAVALGTLTAGVLGLGFGWLAIRRQGIYFAMVTLALAQMIYFLCLQ-AA 127

Query: 138 WTGGDNGLLDVPRPNIEIAGHVLVDLADPRHFYVFVAVLFLLIFAAALRVIRSPFGSTLL 197
           +T G++G+  VPRP +      L+D++DP   Y  V  L +L F    R I SPFG  L 
Sbjct: 128 FTHGEDGIQAVPRPPV----FGLIDVSDPGRLYWLVLALTVLGFLVIARAIHSPFGQVLT 183

Query: 198 AIRENETRAAAIGYDTRHFKILVFMLSGAITGIAGALYAMLLHFAPLSNIDLMMSENILI 257
           AIRENE RA ++GYD   +K++ F+LS A+ G AGA+  M+   A L+++   MS  +++
Sbjct: 184 AIRENEPRAISLGYDVDRYKLVAFVLSAALAGFAGAIKVMVFQLASLTDVHWHMSGEVVL 243

Query: 258 MTIVGGTGSLFGSLLGAGAIVLLGDVLSELWPRWLMLLGVILILVVVFMRGGLWGGLTEL 317
           MT++GG G+L G L+GA  +V + +V +       ++ GVI +  V+  R G+ G +   
Sbjct: 244 MTLIGGVGTLAGPLVGAAVVVGIQNVFASFGAWVTIIQGVIFVACVLLFRRGIMGEIAAW 303

Query: 318 GKR 320
            +R
Sbjct: 304 RQR 306