Pairwise Alignments

Query, 339 a.a., Branched-chain amino acid ABC transporter, permease protein from Pseudomonas putida KT2440

Subject, 355 a.a., ABC-type branched-chain amino acid transport system, permease component from Dechlorosoma suillum PS

 Score =  135 bits (340), Expect = 2e-36
 Identities = 111/341 (32%), Positives = 164/341 (48%), Gaps = 27/341 (7%)

Query: 2   SEKNPLPVAKGRAPALLSLVVASLVALPLLLPS---ATLATEILIFAMAALACNLLLGYT 58
           +++   P+ + R    L LVVA+LV +P++        +    LIF++AAL  N+L GY 
Sbjct: 15  ADQQIFPIRQDRIAIGLILVVAALV-VPMVASEYWIKAILIPFLIFSLAALGLNILTGYA 73

Query: 59  GLLSFGQGIFFGVGAYGAALLMIHLQWGM--FAALLGAAVFGAFLALLVGALAIRRTGIY 116
           G LS G   F  VGA+ A   M  ++ GM    A +G  +  A + +L G  ++R  G Y
Sbjct: 74  GQLSLGSAAFMAVGAFAAYNFMGRIE-GMPVLLAFVGGGLSAAAVGILFGLPSLRIKGFY 132

Query: 117 FVMLTLAFSQMAYFLAYTLSGWTGGDNGLLDVPRPNIEIAGHVLVDLADPRHFYVFVAVL 176
             + TLA +Q     A T  GW   D+    +    I+I G+       P   Y+ V  +
Sbjct: 133 LAVATLA-AQFFIVWALTKFGWFSMDSSSGVITAQEIQILGY---RFDTPISLYLLVLTI 188

Query: 177 FLLIFAAALRVIRSPFGSTLLAIRENETRAAAIGYDTRHFKILVFMLSGAITGIAGALYA 236
             ++  AA  ++RS  G   +A+R+ +  A  IG    H K+L F +S    G+AGALYA
Sbjct: 189 VAVMALAAKNMVRSSVGRAWMAVRDMDVAAEVIGIRIMHTKLLAFAISSFYCGVAGALYA 248

Query: 237 -MLLHFAPLSNIDLMMSENILIMTIVGGTGSLFGSLLGAGAIVLL--------GDVLSEL 287
              L        +L +S  IL M I+GG GS+ GS LGA  IVLL         D L+ L
Sbjct: 249 YAYLGTVEPEGFNLDLSFKILFMIIIGGVGSIMGSFLGAAFIVLLPIFLDVLIQDFLTGL 308

Query: 288 WP------RWLMLLGVILILVVVFMRGGLWGGLTELGKRLL 322
            P        LM+ G ++I  ++    GL   L ++GK  L
Sbjct: 309 LPPSISSNLQLMVFGGLIIFFLIVEPHGL-ARLWQIGKEKL 348