Pairwise Alignments

Query, 250 a.a., Branched-chain amino acid ABC transporter, ATP binding protein from Pseudomonas putida KT2440

Subject, 283 a.a., urea ABC transporter, ATP-binding protein UrtD from Pseudomonas stutzeri RCH2

 Score =  159 bits (402), Expect = 6e-44
 Identities = 90/246 (36%), Positives = 139/246 (56%), Gaps = 8/246 (3%)

Query: 5   LLETRHLELAYGPFKAVAGVDLKVRAGTIHTIIGPNGAGKTSLFHCLTGERQATAGKILF 64
           +L    + +++  FKA+  + L +  G +  IIGPNGAGKT++   +TG+ + T+G   F
Sbjct: 42  ILSLEDINVSFDGFKALTDLSLYIGVGELRCIIGPNGAGKTTMMDVITGKTRPTSGSAWF 101

Query: 65  NGQ-DIIRKPSHGRVALGMARSFQLTSLFQNLSVRENLRLAAQGRDGLGALNFWRSVEHK 123
               D+ R         G+ R FQ  ++F+ LSV ENL LA +    +     W S+  K
Sbjct: 102 GETLDLTRMSEVDIAQAGIGRKFQKPTVFEALSVFENLELAQKTDKSV-----WASLRAK 156

Query: 124 RS--HWNTADQVLERLKLSARAETLAGELSHGQQRVLEVGMSICAKPTLLMLDEPTSGMG 181
            S    +  D+VLE ++L       AG LSHGQ++ LE+GM +   P LL+LDEP +GM 
Sbjct: 157 LSGEQKDRIDEVLETIRLGQSRHRPAGLLSHGQKQFLEIGMLLMQSPQLLLLDEPVAGMT 216

Query: 182 IDDIPVMTDLISDLGRDHTVLLIEHNMSIVMSISQRITVMSHGQILVEGTPEQVRNDERV 241
             +     +L   L R H+++++EH+M  V +I+  +TV+  GQ+L EG+ +QV+ DERV
Sbjct: 217 DAETEFTAELFKSLARKHSLMVVEHDMGFVETIADHVTVLHQGQVLAEGSLQQVQADERV 276

Query: 242 RTAYLG 247
              YLG
Sbjct: 277 IEVYLG 282