Pairwise Alignments

Query, 160 a.a., putative Type IV pili biogenesis protein FimT from Pseudomonas putida KT2440

Subject, 163 a.a., prepilin-type N-terminal cleavage/methylation domain from Pseudomonas stutzeri RCH2

 Score = 48.5 bits (114), Expect = 5e-11
 Identities = 40/153 (26%), Positives = 66/153 (43%), Gaps = 10/153 (6%)

Query: 4   RGVTLIQMLSALAVAVLLTQLGMPAYARMSDDLHRAAAARDLAQALRSARSHALLQGQPV 63
           RG TLI+++  LAV  +L  +  P++              DL  AL+ ARS A+ +G  V
Sbjct: 5   RGFTLIELIVTLAVLAILLAIAAPSFQSTIQSNRTQTITNDLTSALQLARSEAVKRGAKV 64

Query: 64  LVLALDG-------NWGNGWRVVLEHNRQVLREQRLSKPLKITSNRGEQFKFSALGVPMT 116
            +   +G       +WGNGW V ++    VLR           +   E   +   G+ +T
Sbjct: 65  DICRRNGEVCANAADWGNGWLVQVK-GGAVLRVWDAVGGQDTVTGPNETLTYRPNGL-LT 122

Query: 117 SGNSWLGAKLEMC-ERAAARSRYQVVLASSGRV 148
             N        +     + +++Y V L ++GRV
Sbjct: 123 KVNDAAHTTFTVAFANCSGKTQYTVTLTATGRV 155