Pairwise Alignments

Query, 512 a.a., lipid II flippase from Pseudomonas putida KT2440

Subject, 525 a.a., lipid II flippase MurJ from Vibrio cholerae E7946 ATCC 55056

 Score =  397 bits (1020), Expect = e-115
 Identities = 215/507 (42%), Positives = 313/507 (61%), Gaps = 7/507 (1%)

Query: 3   LLKSLAAVSSITMISRVLGFVRDTILARIFGAGVATDAFFIAFKLPNLLRRIFAEGAFSQ 62
           LLKS   VS++T+ISRVLG VRD ++A + GAG + D FF A ++PN LRR+FAEGAFSQ
Sbjct: 10  LLKSGIIVSAMTLISRVLGLVRDVVVANLMGAGASADVFFFANRIPNFLRRLFAEGAFSQ 69

Query: 63  AFVPILAEYKTQQGEEATRTFIAYVSGLLTLVLALVTAIGILAAPWVVWATAPG-FVD-- 119
           AFVP+L EY        TR  IA  SG L +++ +VT IG+L +  V      G F+D  
Sbjct: 70  AFVPVLTEYHASGDINKTRDLIARASGTLGVLVTIVTLIGVLGSGAVTALFGAGWFLDWL 129

Query: 120 ----STEKYALTTDLLRVTFPYIFLISLSSLAGAILNTWNRFSVPAFTPTLLNVAMIAFA 175
               +  K+ L + LL++TFPY++ I+  +L+GAILNT  +F+V +FTP  LNV MI  A
Sbjct: 130 NGGPAAGKFELASLLLKITFPYLWFITFVALSGAILNTLGKFAVSSFTPVFLNVMMILCA 189

Query: 176 VLLTPYFNPPIMALAWGVLAGGLAQLLYQLPALKKIGMLVLPRLNLKDAGVWRVLKQMLP 235
             L+P    P + LA GV  GGL Q L+QLP L K G+LV P+   KD GV ++   M+P
Sbjct: 190 WYLSPNLEQPEVGLAIGVFLGGLVQFLFQLPFLIKAGVLVRPKWGWKDPGVVKIRTLMIP 249

Query: 236 AILGVSVSQISLIINTIFASFLVAGSVSWMYYADRLMELPSGVLGVALGTILLPTLAKTY 295
           A+ GVSVSQI+L+ ++  ASFL  GS+SW+YY+DRL+E P G+ G+A+ T++LP L++ +
Sbjct: 250 ALFGVSVSQINLLFDSFVASFLQTGSISWLYYSDRLLEFPLGLFGIAIATVILPALSRKH 309

Query: 296 ANKDREEYSRILDWGLRLCFLLVLPCTLALAILAEPLTVALFQYGKFSAFDAAMTQRALI 355
            +   + ++  +DWG+R+   L +P  L L +LA+P+ + LF  G+F+  D      +L+
Sbjct: 310 VDAHSDGFAHTMDWGIRMVTFLGIPAMLGLMVLAKPMLMVLFMRGEFTPSDVEQASYSLL 369

Query: 356 AYSVGLLAIILIKVLAPGFYAQQNIRTPVKIAVFTLVCTQLFNLALVGPLAHAGLALAIS 415
           AYS GLL+ +LIKVLAPG+Y++Q+ +TPV+  +  +V   + N        + GLA+A S
Sbjct: 370 AYSSGLLSFMLIKVLAPGYYSRQDTKTPVRYGIIAMVSNIVLNAIFAWFYGYVGLAVATS 429

Query: 416 LGACLNAGLLFWKLRSQQLFEPQPGWAVFLLKLVLAVTLMSAVLLAGMHYMPAWEQGIML 475
           + A LN  LL+  L  Q ++        F+ +L +A  +M+  LL  +  M  W    + 
Sbjct: 430 MSAFLNMALLYRGLHLQGVYHLTRKTVWFVARLAMAGAVMTGALLWQLDTMATWLSWGIS 489

Query: 476 ERFLRLGALILAGVVTYFGCLYLCGFR 502
           +R L L  LI  GV +Y   L L G R
Sbjct: 490 QRALTLTGLIGLGVASYLAILLLLGVR 516