Pairwise Alignments

Query, 512 a.a., lipid II flippase from Pseudomonas putida KT2440

Subject, 540 a.a., integral membrane protein MviN from Synechococcus elongatus PCC 7942

 Score =  152 bits (385), Expect = 2e-41
 Identities = 135/511 (26%), Positives = 231/511 (45%), Gaps = 30/511 (5%)

Query: 5   KSLAAVSSI----TMISRVLGFVRDTILARIFGAGVATDAFFIAFKLPNLLRRIFA--EG 58
           +SLA ++ I    T++S+V G VR   +A  FG G A DA+  A+ +P  L  +     G
Sbjct: 9   RSLAGIAGIVAVATLLSKVFGLVRQQAIAAAFGVGPAFDAYNYAYVIPGFLLILLGGING 68

Query: 59  AFSQAFVPILAEYKTQQGEEATRTFIAYVSGLLTLVLALVTAIGILAAPWVVWATAPGFV 118
            F  A V +LA+   Q       T    ++ L+ + L +VT + ++ A  ++   APG  
Sbjct: 69  PFHSAMVSVLAKRDRQDSGPLVET----ITTLVGISLLIVTVVIVVFADPLIGLVAPGLE 124

Query: 119 ---DSTEKYALTTDLLRVTFPYIFLISLSSLAGAILNTWNRFSVPAFTPTLLNVAMIAFA 175
                 E  A+    LR+  P   L  L  +   +LN  + + +P+ +P   +V +IA  
Sbjct: 125 LTPTGQETRAIAVLQLRIMAPMALLAGLIGIGFGVLNAADTYWLPSISPLFSSVTVIAGV 184

Query: 176 VLL-----TPYFNPPI-----MALAWGVLAGGLAQLLYQLPALKKIGMLVLP-RLNLKDA 224
            LL     +   +P +     + LA   L G + Q L QLP+  + G+  L  R   +  
Sbjct: 185 GLLWWQVGSRITSPQLAIVGGLVLAGSTLLGAILQWLIQLPSQFRHGLAGLRLRFEWQRP 244

Query: 225 GVWRVLKQMLPAILGVSVSQISLIINTIFASFLVAGSVSWMYYADRLMELPSGVLGVALG 284
            V  VL+ + PA     + QI++  +  FASF+   +   + YA  L++ P G+L   + 
Sbjct: 245 EVKEVLRILGPATFSSGMLQINVYTDLFFASFIPQAAAG-LGYAGLLVQTPLGILSNVIL 303

Query: 285 TILLPTLAKTYANKDREEYSRILDWGLRLCFLLVLPCTLALAILAEPLTVALFQYGKFSA 344
             LLP L++        E  + +  GL L  LL+LP    +A LA P+   +++ G F  
Sbjct: 304 VPLLPVLSRLAEPDQWPELKQRIRQGLFLTALLMLPLGALMAALALPIVQLVYERGAFQT 363

Query: 345 FDAAMTQRALIAYSVGLLAIILIKVLAPGFYAQQNIRTPVKIAVFTLVCTQLFNLALVGP 404
               +    L+AYS+G+   +   VL   FYA  + +TP +I++  +    LF+  L+GP
Sbjct: 364 DATDLVAALLVAYSIGMFVYLGRDVLVRVFYALGDGQTPFRISMINIFLNALFDWLLIGP 423

Query: 405 LAHAGLALAISLGACLNAGLLFWKLRSQQLFEPQPGWAVFLLKLVLAVTLMSAVLLAGMH 464
               GL LA      ++   L W L  +    P   W  ++   +L++      LLA   
Sbjct: 424 FGATGLVLATVSVNIISLIALLWILHRRLGGLPLLPWGGWI--TLLSIWSFGCGLLAYFT 481

Query: 465 YMP---AWEQGIMLERFLRLGALILAGVVTY 492
            +     W +  ++   ++L      G++T+
Sbjct: 482 QISLDRLWPESTLILLIVKLAIASGVGLLTF 512