Pairwise Alignments

Query, 512 a.a., lipid II flippase from Pseudomonas putida KT2440

Subject, 509 a.a., murein biosynthesis integral membrane protein MurJ from Rhodopseudomonas palustris CGA009

 Score =  276 bits (706), Expect = 1e-78
 Identities = 185/514 (35%), Positives = 265/514 (51%), Gaps = 17/514 (3%)

Query: 3   LLKSLAAVSSITMISRVLGFVRDTILARIFGAGVATDAFFIAFKLPNLLRRIFAEGAFSQ 62
           +LK +  V   T++SR+ GF RD +LA I GAG   DAFF+A +LPN  R IFAEGAF+ 
Sbjct: 1   MLKRIFTVGGFTLLSRLTGFARDIMLAAILGAGPVADAFFVALRLPNHFRAIFAEGAFNA 60

Query: 63  AFVPILAEYKTQQGEEATRTFIAYVSGLLTLVLALVTAIGILAAPWVVWATAPGFVDSTE 122
           AFVP  A    ++GE + + F   +  LL L   ++ A+ +   P ++   APGF D  E
Sbjct: 61  AFVPAYAHVHGEKGEASAKLFADRIFTLLFLSQLVLLAVALAFMPQMMSILAPGFTDDPE 120

Query: 123 KYALTTDLLRVTFPYIFLISLSSLAGAILNTWNRFSVPAFTPTLLNVAMIAFAVLLTPYF 182
           + AL  +L R+TFPY+ LI+L +L G ILN   RF+  A     LN++M+A  + L  +F
Sbjct: 121 QRALAIELTRITFPYLLLITLVTLYGGILNVMQRFASAAAASIFLNISMMA-TLALAAFF 179

Query: 183 NPPIMALAWGVLAGGLAQLLYQLPALKKIGMLVLPRLNLKDAGVWRVLKQMLPAILGVSV 242
                A AWGVL  G+ Q       L   G L        D  V    + + PA LG   
Sbjct: 180 PSAGHAAAWGVLISGVLQYFLLAGDLSLHGGLPRFARPKLDEDVRAFFRALGPATLGSMG 239

Query: 243 SQISLIINTIFASFLVAGSVSWMYYADRLMELPSGVLGVALGTILLPTLAKTYANKDREE 302
           +Q++L  +TI A+FL AG++S +YYADRL +LP GV+G+A+GT+LLP +++     D   
Sbjct: 240 TQLALFADTIIATFLPAGALSALYYADRLNQLPIGVIGIAIGTVLLPEMSRQLTAGDDAG 299

Query: 303 YSRILDWGLRLCFLLVLPCTLALAILAEPLTVALFQYGKFSAFDAAMTQRALIAYSVGLL 362
                        L  +P   A   + + +  A+F  G F+  DA      L AY++ L+
Sbjct: 300 AKASQRRAFEFTLLFSVPFVAAFLTVPDEIMRAMFARGAFTRADAISAGTTLAAYAIALI 359

Query: 363 AIILIKVLAPGFYAQQNIRTPVKIAVFTLVCTQLFNLALVGPLAHAGLALAISLGACLNA 422
             +LI+     FYA+++  TPVK A+  +    +   AL+G LA  GLALA + GA +N 
Sbjct: 360 PFVLIRSAVAPFYARKDTATPVKAALTGVATNVVLKFALMGSLAQVGLALATAAGAWINL 419

Query: 423 GLLFWKLRSQQLFEPQPGWAVFLLKLVLAVTLMS--AVLLAGMHYMPAW--EQGIMLERF 478
            L+ +       F  + G+  F  +LV A+       VLL    ++ AW     + L   
Sbjct: 420 LLVIF-------FSVRAGYLEFDRELVRAILKFGIIGVLLGAALWLTAWLAPPYLALLPA 472

Query: 479 LR----LGALILAGVVTYFGCLYLCGFRPRHFAR 508
           LR    L  LIL G V Y G   L  F PR   R
Sbjct: 473 LRSEAALALLILVGAVIY-GAAILILFGPRWIKR 505