Pairwise Alignments

Query, 305 a.a., Transcriptional regulator, LysR family from Pseudomonas putida KT2440

Subject, 320 a.a., LysR family transcriptional regulator (RefSeq) from Shewanella loihica PV-4

 Score =  192 bits (489), Expect = 7e-54
 Identities = 105/285 (36%), Positives = 163/285 (57%)

Query: 11  VSDFDIRLLKIYRSVVECGGFSAAENVLGIGRSAISQQMNDLEQRLGLRLCQRGRAGFSL 70
           ++++D+RLL+I+R+VVE GGF+AAEN LG+ RS IS  M++LE R+ L+LC RGR GF+L
Sbjct: 11  ITEYDLRLLRIFRTVVENGGFAAAENELGVTRSTISVHMSNLESRMKLKLCSRGRGGFAL 70

Query: 71  TEEGREVYHSALQLLSALETFRTEVNGLHQHLRGELNIGLTDNLVTLPHMRITHALAELK 130
           TE G+ VYH+ ++L  +L  F   VN L + L GEL I   D L      ++   +A + 
Sbjct: 71  TEAGQAVYHACIELFDSLNDFSMFVNNLGEELIGELVILCADQLDYGMQQKLAQVIAYIH 130

Query: 131 DRGPDVRIQIRMIAPSQVEHGVLDGSLHVGVVPQTSPLSGLEYQPLYSERSLLYCAVGHP 190
           +R P + + +   A  Q+E  +L    HVG++P    + GL YQ ++SE   L C+  HP
Sbjct: 131 ERQPQLHLILDGEALHQIEKSLLQDKAHVGLLPSYQQIQGLNYQTIFSEPIYLCCSAKHP 190

Query: 191 LFYADDQQIDDERLNSQEAITPTFRLPADIQAHYQALNCTASASDREGMAFLILTGRYIG 250
            F+  D++I  E L    +I P   +  + +   + LN +A A   +    LIL+G YIG
Sbjct: 191 YFHLSDKEISAEMLAKTPSIHPGVDIDPEGREQLKRLNLSAKAYQFDTRKTLILSGCYIG 250

Query: 251 YLPDHYAMFWVQQGRLRALKPKERFYDLSLSWVTRKGRRPNLVLE 295
           YLP  Y    ++Q  ++ +   E  Y  +LS V ++  R +  +E
Sbjct: 251 YLPLSYIQEELKQQEIKIIHGDEACYQFNLSMVVKQSARESAKVE 295