Pairwise Alignments

Query, 194 a.a., putative ribosome-binding factor from Pseudomonas putida KT2440

Subject, 202 a.a., conserved hypothetical protein (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

 Score = 83.6 bits (205), Expect = 2e-21
 Identities = 41/109 (37%), Positives = 69/109 (63%), Gaps = 5/109 (4%)

Query: 16  RKSRFITLAGPISSAAEAMSFIERHSD--LAATHNCWAWKLGA---QYRSSDDGEPGGTA 70
           ++S+FI +A P+ +  E  + +E +      A H C+A+ LGA    +R++D+GEP GTA
Sbjct: 21  KRSKFIAIALPVRTLDEIKAHLETYQKKYYDARHVCYAYMLGAARKDFRANDNGEPSGTA 80

Query: 71  GRPILAAIEAQDCDQVVVLVIRWYGGIQLGTGGLARAYGGGANKCLQQA 119
           G+PIL  I + +   ++++V+R++GGI+LGT GL  AY   A + +  A
Sbjct: 81  GKPILGQINSNELTDILIIVVRYFGGIKLGTSGLIVAYKAAAAEAISAA 129