Pairwise Alignments

Query, 647 a.a., Methyl-accepting chemotaxis transducer from Pseudomonas putida KT2440

Subject, 640 a.a., Methyl-accepting chemotaxis protein from Pseudomonas stutzeri RCH2

 Score =  236 bits (601), Expect = 3e-66
 Identities = 138/350 (39%), Positives = 202/350 (57%), Gaps = 3/350 (0%)

Query: 298 VIAVVLAALFAVVGA-AFAKLIVRPINSVTNGLEDIAQGEGDLTRNLEIRGRDETAQLAN 356
           +++ +LA +  V+ A    + I+ P+ +    +E IA G  DL+   +I+ RDE   L  
Sbjct: 292 IVSTLLALVLGVLAAWLITRQIILPLRTTMADVERIASG--DLSETAQIQRRDELGVLQR 349

Query: 357 WFNQFLGAIRSLIQHIGTAASKILSTSSSSTRVSSDMAEAAGRQREAVDMVSTAFHEMVA 416
              Q    +R LI  I    S+I + +   + V+   +     Q+E  D V+TA HEM A
Sbjct: 350 GIQQMGSTLRELIGGIRDGVSQISAAAEELSAVTQQTSAGVNSQKEETDQVATAMHEMSA 409

Query: 417 TANEVARSCSQAAQSADSGQQQAREGQQQIDAAVHSVDRLSHEIEQSAQSIQQLERDSNA 476
           T  EVAR+  QAA +A     +AREG + +   V  ++R++  + +S +++  L+ +S+ 
Sbjct: 410 TVQEVARNAEQAALAATEADSEAREGDRVVTEVVTQIERMASAVVRSTEAMTALQEESDK 469

Query: 477 IQSILGTIRSIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRALAKRTADSTAEIDGL 536
           I S++  IR++AEQTNLLALNAAIEAARAGE GRGFAVVADEVR LA+RT  ST EI+GL
Sbjct: 470 IGSVMNVIRAVAEQTNLLALNAAIEAARAGEAGRGFAVVADEVRGLAQRTQKSTEEIEGL 529

Query: 537 LGNLASRTAEVAEQMHASLEVSQQSVSRIGLARDSFGQIRESVDVIRDMNTQIATAAEEQ 596
           +  L + T +VA  MH S +++   V     A  S G I  +V  I+ MN QIA AAEEQ
Sbjct: 530 VAALQNGTQQVASIMHTSRDLTDSGVELARRAGASLGSITRTVSNIQAMNQQIAAAAEEQ 589

Query: 597 HQVAEDINRHISQIHGDAQLVAELAQAARQDSESLAGLSNELDTLVRRFR 646
             VAE+I+R +  +   ++  A  ++     S  LA L  +L  +V RFR
Sbjct: 590 SAVAEEISRSVVNVRDVSEQTAAASEETAASSTELARLGGQLQMMVSRFR 639



 Score = 42.7 bits (99), Expect = 5e-08
 Identities = 65/260 (25%), Positives = 111/260 (42%), Gaps = 40/260 (15%)

Query: 392 DMAEAA-GRQREAVDMVSTAFHEMVATANEVARSCSQAAQSADSGQQQAREGQQQIDAAV 450
           D A+A  GR   A+D  S A  + + T  +  RS  QA ++A     +AR  Q+  D   
Sbjct: 206 DTAQATLGRHAGALDANSGAALQQIRTVLDEYRSAIQALETATQAIAKAR--QEMTDQ-- 261

Query: 451 HSVDRLSHEIEQSAQSIQQLERDSNAIQSILGTIRSIAEQTNLLALNAAIEAARAGEQGR 510
                   EI + + S+ Q + D   ++S     RS    + LLAL   + AA       
Sbjct: 262 ------QKEIVRISDSLYQFQLDRLDVES--SDARSRLIVSTLLALVLGVLAA------- 306

Query: 511 GFAVVADEVRALAKRTADSTAEIDGLLGNLASRTAEVAEQMHASLEVSQQSVSRIGLARD 570
              ++  ++  L  RT  + A+++ +     S TA++  Q    L V Q+ + ++G    
Sbjct: 307 --WLITRQI-ILPLRT--TMADVERIASGDLSETAQI--QRRDELGVLQRGIQQMG---- 355

Query: 571 SFGQIRESVDVIRDMNTQIATAAEEQHQVAEDINRHISQIHGDAQLVA-------ELAQA 623
               +RE +  IRD  +QI+ AAEE   V +  +  ++    +   VA          Q 
Sbjct: 356 --STLRELIGGIRDGVSQISAAAEELSAVTQQTSAGVNSQKEETDQVATAMHEMSATVQE 413

Query: 624 ARQDSESLAGLSNELDTLVR 643
             +++E  A  + E D+  R
Sbjct: 414 VARNAEQAALAATEADSEAR 433